Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 AC103592.1-201ENST00000394513 664 ntBASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 AC012362.1-201ENST00000434906 739 ntBASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 AL354861.1-201ENST00000445213 355 ntBASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 AC005041.3-201ENST00000606287 649 ntBASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 CYP51A1P3-201ENST00000400072 1428 ntBASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 AC073869.2-201ENST00000417338 1026 ntBASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 AC092638.2-201ENST00000441105 947 ntBASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 KRT18P66-201ENST00000452970 1269 ntBASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 NEU3-207ENST00000534628 746 ntTSL 2 BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 ELP5-212ENST00000574255 671 ntTSL 2 BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 MIR2392-201ENST00000584881 84 ntBASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPAP1Q9BWH6 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 AC072061.1-201ENST00000569710 2234 ntBASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 AL357563.1-201ENST00000404728 395 ntBASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 PIN4P1-201ENST00000451079 396 ntBASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 AL132780.4-201ENST00000624870 1135 ntBASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms