Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC012617.1-204ENST00000586340 2305 ntBASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 GSTM2P1-201ENST00000405166 654 ntBASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 AC010335.3-201ENST00000623767 531 ntBASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 CDC20P1-201ENST00000488829 1500 ntBASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 VOPP1-204ENST00000418904 1317 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 MKRN7P-201ENST00000433469 1371 ntBASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 AP001922.5-201ENST00000527803 651 ntTSL 4 BASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 AP001979.1-201ENST00000529222 751 ntBASIC9.13□□□□□ -0.95
ALMS1Q8TCU4 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 SPINK2-201ENST00000248701 613 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 CLK2P1-201ENST00000416636 1294 ntBASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 AC010997.1-201ENST00000447646 350 ntBASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 C5orf38-203ENST00000457752 387 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 AKR1B1P3-201ENST00000525311 588 ntBASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 MIR4539-201ENST00000579784 60 ntBASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 MIR378I-201ENST00000582688 76 ntBASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 AC011239.2-201ENST00000624820 1489 ntBASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 SNORD88B-201ENST00000408454 91 ntBASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 AC096677.3-201ENST00000413162 387 ntBASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 FAM138A-201ENST00000417324 1187 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 FAM138D-201ENST00000504074 1187 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 FAM138E-201ENST00000507796 1187 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 DDC-212ENST00000615193 1674 ntTSL 3 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 SERF2-204ENST00000402131 586 ntTSL 2 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 AC104623.1-201ENST00000446357 546 ntTSL 4 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 AL589743.3-201ENST00000604121 517 ntBASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 RCC2P1-201ENST00000452257 1476 ntBASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALMS1Q8TCU4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms