Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
LRRC28Q86X40 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
LRRC28Q86X40 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LRRC28Q86X40 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRC28Q86X40 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LRRC28Q86X40 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRC28Q86X40 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
LRRC28Q86X40 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LRRC28Q86X40 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRC28Q86X40 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRC28Q86X40 AC006001.1-201ENST00000325130 474 ntBASIC12.72□□□□□ -0.37
LRRC28Q86X40 TPM3P8-201ENST00000330554 643 ntBASIC12.72□□□□□ -0.37
LRRC28Q86X40 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRC28Q86X40 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
LRRC28Q86X40 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.72□□□□□ -0.37
LRRC28Q86X40 CD8B2-202ENST00000417670 633 ntBASIC12.72□□□□□ -0.37
LRRC28Q86X40 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRC28Q86X40 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRC28Q86X40 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.72□□□□□ -0.37
LRRC28Q86X40 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.72□□□□□ -0.37
LRRC28Q86X40 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.72□□□□□ -0.37
LRRC28Q86X40 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.72□□□□□ -0.37
LRRC28Q86X40 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRC28Q86X40 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRC28Q86X40 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LRRC28Q86X40 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.72□□□□□ -0.37
LRRC28Q86X40 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.72□□□□□ -0.37
LRRC28Q86X40 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRC28Q86X40 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LRRC28Q86X40 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LRRC28Q86X40 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
LRRC28Q86X40 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.72□□□□□ -0.37
LRRC28Q86X40 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
LRRC28Q86X40 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LRRC28Q86X40 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.72□□□□□ -0.37
LRRC28Q86X40 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
LRRC28Q86X40 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
LRRC28Q86X40 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRC28Q86X40 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
LRRC28Q86X40 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LRRC28Q86X40 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.72□□□□□ -0.37
LRRC28Q86X40 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.72□□□□□ -0.37
LRRC28Q86X40 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRC28Q86X40 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
LRRC28Q86X40 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRC28Q86X40 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRC28Q86X40 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRC28Q86X40 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
LRRC28Q86X40 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRC28Q86X40 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LRRC28Q86X40 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
LRRC28Q86X40 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
LRRC28Q86X40 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LRRC28Q86X40 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRC28Q86X40 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRC28Q86X40 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LRRC28Q86X40 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRC28Q86X40 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.71□□□□□ -0.37
LRRC28Q86X40 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.71□□□□□ -0.37
LRRC28Q86X40 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRC28Q86X40 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LRRC28Q86X40 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRC28Q86X40 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.71□□□□□ -0.37
LRRC28Q86X40 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRC28Q86X40 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.71□□□□□ -0.37
LRRC28Q86X40 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRC28Q86X40 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
LRRC28Q86X40 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
LRRC28Q86X40 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.71□□□□□ -0.37
LRRC28Q86X40 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.71□□□□□ -0.37
LRRC28Q86X40 HLA-V-201ENST00000429037 534 ntBASIC12.71□□□□□ -0.37
LRRC28Q86X40 FAM197Y7-201ENST00000432892 766 ntBASIC12.71□□□□□ -0.37
LRRC28Q86X40 EIF3FP3-201ENST00000434851 1086 ntBASIC12.71□□□□□ -0.37
LRRC28Q86X40 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LRRC28Q86X40 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.71□□□□□ -0.37
LRRC28Q86X40 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC12.71□□□□□ -0.37
LRRC28Q86X40 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.71□□□□□ -0.37
LRRC28Q86X40 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRC28Q86X40 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
LRRC28Q86X40 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.71□□□□□ -0.37
LRRC28Q86X40 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.71□□□□□ -0.37
LRRC28Q86X40 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.71□□□□□ -0.37
LRRC28Q86X40 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.71□□□□□ -0.37
LRRC28Q86X40 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRC28Q86X40 STRCP1-201ENST00000509801 5328 ntBASIC12.71□□□□□ -0.37
LRRC28Q86X40 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
LRRC28Q86X40 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LRRC28Q86X40 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
LRRC28Q86X40 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LRRC28Q86X40 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
LRRC28Q86X40 AC003102.2-201ENST00000589195 1469 ntBASIC12.71□□□□□ -0.38
LRRC28Q86X40 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.71□□□□□ -0.38
LRRC28Q86X40 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
LRRC28Q86X40 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LRRC28Q86X40 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LRRC28Q86X40 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LRRC28Q86X40 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.71□□□□□ -0.38
LRRC28Q86X40 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LRRC28Q86X40 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms