Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 KRT8P31-201ENST00000504812 1408 ntBASIC13.64□□□□□ -0.23
RNF44Q7L0R7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 FAM90A2P-201ENST00000511144 1395 ntBASIC13.63□□□□□ -0.23
RNF44Q7L0R7 FAM90A25P-201ENST00000528404 1395 ntBASIC13.63□□□□□ -0.23
RNF44Q7L0R7 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 KRT17P5-201ENST00000332088 839 ntBASIC13.63□□□□□ -0.23
RNF44Q7L0R7 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 OR8T1P-201ENST00000421347 918 ntBASIC13.63□□□□□ -0.23
RNF44Q7L0R7 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 AC026320.2-201ENST00000434379 478 ntBASIC13.63□□□□□ -0.23
RNF44Q7L0R7 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 AC105129.2-201ENST00000559536 390 ntBASIC13.63□□□□□ -0.23
RNF44Q7L0R7 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 NAT9-220ENST00000582870 896 ntTSL 5 BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 AC012044.1-201ENST00000603431 297 ntBASIC13.63□□□□□ -0.23
RNF44Q7L0R7 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 AC006453.1-201ENST00000636037 1257 ntBASIC13.63□□□□□ -0.23
RNF44Q7L0R7 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 KRT18P9-201ENST00000604826 1300 ntBASIC13.63□□□□□ -0.23
RNF44Q7L0R7 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 CICP16-201ENST00000502609 2813 ntBASIC13.63□□□□□ -0.23
RNF44Q7L0R7 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF44Q7L0R7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 OR2K2-202ENST00000374428 1038 ntBASIC13.62□□□□□ -0.23
RNF44Q7L0R7 BAX-205ENST00000391871 687 ntTSL 5 BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.62□□□□□ -0.23
RNF44Q7L0R7 RN7SL769P-201ENST00000469386 295 ntBASIC13.62□□□□□ -0.23
RNF44Q7L0R7 RN7SL67P-201ENST00000492147 296 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms