Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 AC242376.1-201ENST00000559033 726 ntBASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 AC106872.11-201ENST00000605838 421 ntBASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 AC007718.1-201ENST00000621078 280 ntBASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.83□□□□□ -0.03
RFWD3Q6PCD5 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
RFWD3Q6PCD5 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RFWD3Q6PCD5 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.83□□□□□ -0.03
RFWD3Q6PCD5 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RFWD3Q6PCD5 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 RPS9P1-201ENST00000419943 583 ntBASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 DUX4L50-201ENST00000455245 715 ntBASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 RN7SL530P-201ENST00000485097 298 ntBASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 AC140658.4-201ENST00000561990 352 ntBASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 AC016397.2-201ENST00000624848 1985 ntBASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RFWD3Q6PCD5 KRT8P19-201ENST00000551916 1455 ntBASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 AC091046.1-201ENST00000331871 207 ntBASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms