Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AC092580.1-201ENST00000433998 658 ntBASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 KC6-207ENST00000600644 2311 ntTSL 3 BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TTC39BQ5VTQ0 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 AC111170.3-201ENST00000624282 2464 ntBASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 AC107918.4-201ENST00000641966 3141 ntBASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 RNA5SP359-201ENST00000364838 113 ntBASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 AC012618.1-201ENST00000461223 412 ntBASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 RN7SL530P-201ENST00000485097 298 ntBASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 AC245884.6-201ENST00000515672 1067 ntBASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 AL122018.1-201ENST00000446607 2310 ntBASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 PPT1-213ENST00000641319 2388 ntBASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.81□□□□□ -0.04
TTC39BQ5VTQ0 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TTC39BQ5VTQ0 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 296.6 ms