Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN6P56747 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN6P56747 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN6P56747 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN6P56747 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.59□□□□□ -0.23
CLDN6P56747 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
CLDN6P56747 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CLDN6P56747 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CLDN6P56747 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13.58□□□□□ -0.23
CLDN6P56747 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
CLDN6P56747 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC13.58□□□□□ -0.23
CLDN6P56747 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CLDN6P56747 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN6P56747 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CLDN6P56747 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CLDN6P56747 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.58□□□□□ -0.24
CLDN6P56747 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.58□□□□□ -0.24
CLDN6P56747 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CLDN6P56747 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN6P56747 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN6P56747 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
CLDN6P56747 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN6P56747 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN6P56747 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CLDN6P56747 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CLDN6P56747 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN6P56747 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.58□□□□□ -0.24
CLDN6P56747 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN6P56747 OR7E115P-201ENST00000382617 1024 ntBASIC13.58□□□□□ -0.24
CLDN6P56747 MIR1301-201ENST00000408518 82 ntBASIC13.58□□□□□ -0.24
CLDN6P56747 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.58□□□□□ -0.24
CLDN6P56747 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC13.58□□□□□ -0.24
CLDN6P56747 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC13.58□□□□□ -0.24
CLDN6P56747 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC13.58□□□□□ -0.24
CLDN6P56747 STK24P1-201ENST00000455035 1291 ntBASIC13.58□□□□□ -0.24
CLDN6P56747 BPIFB5P-201ENST00000457066 1099 ntBASIC13.58□□□□□ -0.24
CLDN6P56747 RN7SL788P-201ENST00000460504 316 ntBASIC13.58□□□□□ -0.24
CLDN6P56747 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC13.58□□□□□ -0.24
CLDN6P56747 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC13.58□□□□□ -0.24
CLDN6P56747 AC008026.2-201ENST00000495438 348 ntBASIC13.58□□□□□ -0.24
CLDN6P56747 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.58□□□□□ -0.24
CLDN6P56747 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC13.58□□□□□ -0.24
CLDN6P56747 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CLDN6P56747 MT2A-202ENST00000561491 581 ntTSL 2 BASIC13.58□□□□□ -0.24
CLDN6P56747 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC13.58□□□□□ -0.24
CLDN6P56747 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN6P56747 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC13.58□□□□□ -0.24
CLDN6P56747 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC13.58□□□□□ -0.24
CLDN6P56747 AC091769.1-201ENST00000619576 568 ntBASIC13.58□□□□□ -0.24
CLDN6P56747 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC13.58□□□□□ -0.24
CLDN6P56747 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN6P56747 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN6P56747 CCT8L1P-201ENST00000465400 1674 ntBASIC13.58□□□□□ -0.24
CLDN6P56747 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN6P56747 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CLDN6P56747 AC232323.1-201ENST00000540724 2099 ntBASIC13.58□□□□□ -0.24
CLDN6P56747 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN6P56747 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN6P56747 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN6P56747 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.58□□□□□ -0.24
CLDN6P56747 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.58□□□□□ -0.24
CLDN6P56747 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.58□□□□□ -0.24
CLDN6P56747 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CLDN6P56747 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.58□□□□□ -0.24
CLDN6P56747 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN6P56747 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN6P56747 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CLDN6P56747 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN6P56747 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.57□□□□□ -0.24
CLDN6P56747 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN6P56747 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.57□□□□□ -0.24
CLDN6P56747 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN6P56747 FGD5P1-202ENST00000614866 2498 ntBASIC13.57□□□□□ -0.24
CLDN6P56747 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN6P56747 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN6P56747 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDN6P56747 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.57□□□□□ -0.24
CLDN6P56747 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CLDN6P56747 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDN6P56747 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN6P56747 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN6P56747 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN6P56747 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN6P56747 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN6P56747 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CLDN6P56747 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.57□□□□□ -0.24
CLDN6P56747 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDN6P56747 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CLDN6P56747 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC13.57□□□□□ -0.24
CLDN6P56747 HNRNPA1P58-201ENST00000403629 610 ntBASIC13.57□□□□□ -0.24
CLDN6P56747 AC006987.1-201ENST00000413610 527 ntBASIC13.57□□□□□ -0.24
CLDN6P56747 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC13.57□□□□□ -0.24
CLDN6P56747 AL929302.1-201ENST00000426556 871 ntBASIC13.57□□□□□ -0.24
CLDN6P56747 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CLDN6P56747 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC13.57□□□□□ -0.24
CLDN6P56747 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CLDN6P56747 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN6P56747 AC083801.1-201ENST00000491689 358 ntBASIC13.57□□□□□ -0.24
CLDN6P56747 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN6P56747 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms