Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GFRA1P56159 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
GFRA1P56159 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
GFRA1P56159 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
GFRA1P56159 OR2I1P-209ENST00000641730 5365 ntBASIC12.66□□□□□ -0.38
GFRA1P56159 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GFRA1P56159 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GFRA1P56159 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GFRA1P56159 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.66□□□□□ -0.38
GFRA1P56159 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
GFRA1P56159 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GFRA1P56159 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
GFRA1P56159 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
GFRA1P56159 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GFRA1P56159 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
GFRA1P56159 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
GFRA1P56159 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
GFRA1P56159 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GFRA1P56159 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GFRA1P56159 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GFRA1P56159 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GFRA1P56159 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GFRA1P56159 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
GFRA1P56159 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.65□□□□□ -0.38
GFRA1P56159 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GFRA1P56159 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
GFRA1P56159 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GFRA1P56159 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GFRA1P56159 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GFRA1P56159 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.65□□□□□ -0.38
GFRA1P56159 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GFRA1P56159 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
GFRA1P56159 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GFRA1P56159 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
GFRA1P56159 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GFRA1P56159 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GFRA1P56159 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC12.65□□□□□ -0.38
GFRA1P56159 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GFRA1P56159 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GFRA1P56159 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
GFRA1P56159 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GFRA1P56159 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC12.65□□□□□ -0.38
GFRA1P56159 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GFRA1P56159 FXNP2-201ENST00000411625 547 ntBASIC12.65□□□□□ -0.38
GFRA1P56159 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GFRA1P56159 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.65□□□□□ -0.38
GFRA1P56159 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GFRA1P56159 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
GFRA1P56159 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.65□□□□□ -0.38
GFRA1P56159 MIR4265-201ENST00000582152 99 ntBASIC12.65□□□□□ -0.38
GFRA1P56159 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
GFRA1P56159 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
GFRA1P56159 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
GFRA1P56159 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GFRA1P56159 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
GFRA1P56159 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
GFRA1P56159 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GFRA1P56159 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
GFRA1P56159 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
GFRA1P56159 AC061965.1-201ENST00000560524 1465 ntBASIC12.65□□□□□ -0.38
GFRA1P56159 SBF1P1-201ENST00000444527 5631 ntBASIC12.65□□□□□ -0.39
GFRA1P56159 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
GFRA1P56159 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
GFRA1P56159 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
GFRA1P56159 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
GFRA1P56159 KRT8P24-201ENST00000560290 1559 ntBASIC12.64□□□□□ -0.39
GFRA1P56159 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.64□□□□□ -0.39
GFRA1P56159 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
GFRA1P56159 AC138761.6-201ENST00000583997 1423 ntBASIC12.64□□□□□ -0.39
GFRA1P56159 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
GFRA1P56159 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.64□□□□□ -0.39
GFRA1P56159 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.64□□□□□ -0.39
GFRA1P56159 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.64□□□□□ -0.39
GFRA1P56159 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.64□□□□□ -0.39
GFRA1P56159 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
GFRA1P56159 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
GFRA1P56159 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC12.64□□□□□ -0.39
GFRA1P56159 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC12.64□□□□□ -0.39
GFRA1P56159 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
GFRA1P56159 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC12.64□□□□□ -0.39
GFRA1P56159 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 RPL7P35-201ENST00000446943 740 ntBASIC12.64□□□□□ -0.39
GFRA1P56159 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC12.64□□□□□ -0.39
GFRA1P56159 RPL18AP3-201ENST00000462885 528 ntBASIC12.64□□□□□ -0.39
GFRA1P56159 RN7SL767P-201ENST00000493013 295 ntBASIC12.64□□□□□ -0.39
GFRA1P56159 AP000911.2-201ENST00000534330 502 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms