Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BRCA2P51587 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
BRCA2P51587 HNRNPA1P68-201ENST00000425806 979 ntBASIC15.25■□□□□ 0.03
BRCA2P51587 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC15.25■□□□□ 0.03
BRCA2P51587 ATP5G1P7-201ENST00000444398 400 ntBASIC15.25■□□□□ 0.03
BRCA2P51587 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC15.25■□□□□ 0.03
BRCA2P51587 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC15.25■□□□□ 0.03
BRCA2P51587 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
BRCA2P51587 OR4A49P-201ENST00000527050 632 ntBASIC15.25■□□□□ 0.03
BRCA2P51587 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC15.25■□□□□ 0.03
BRCA2P51587 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
BRCA2P51587 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.25■□□□□ 0.03
BRCA2P51587 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.25■□□□□ 0.03
BRCA2P51587 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BRCA2P51587 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
BRCA2P51587 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BRCA2P51587 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.25■□□□□ 0.03
BRCA2P51587 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BRCA2P51587 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BRCA2P51587 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BRCA2P51587 RN7SL677P-201ENST00000466970 319 ntBASIC15.25■□□□□ 0.03
BRCA2P51587 AC138035.2-201ENST00000509192 727 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
BRCA2P51587 COQ10BP2-201ENST00000513804 724 ntBASIC15.25■□□□□ 0.03
BRCA2P51587 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC15.25■□□□□ 0.03
BRCA2P51587 LINC02193-207ENST00000621799 723 ntTSL 5 BASIC15.25■□□□□ 0.03
BRCA2P51587 AC069287.1-202ENST00000622626 723 ntTSL 5 BASIC15.25■□□□□ 0.03
BRCA2P51587 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.25■□□□□ 0.03
BRCA2P51587 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
BRCA2P51587 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
BRCA2P51587 IMPDH1P5-201ENST00000439688 1540 ntBASIC15.25■□□□□ 0.03
BRCA2P51587 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.25■□□□□ 0.03
BRCA2P51587 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BRCA2P51587 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.25■□□□□ 0.03
BRCA2P51587 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
BRCA2P51587 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BRCA2P51587 RN7SL487P-201ENST00000468140 344 ntBASIC15.24■□□□□ 0.03
BRCA2P51587 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BRCA2P51587 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BRCA2P51587 MIR4309-201ENST00000582498 83 ntBASIC15.24■□□□□ 0.03
BRCA2P51587 AL078624.1-201ENST00000604004 547 ntBASIC15.24■□□□□ 0.03
BRCA2P51587 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
BRCA2P51587 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC15.24■□□□□ 0.03
BRCA2P51587 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
BRCA2P51587 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BRCA2P51587 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC15.24■□□□□ 0.03
BRCA2P51587 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BRCA2P51587 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BRCA2P51587 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
BRCA2P51587 AC117489.1-201ENST00000625169 3217 ntBASIC15.24■□□□□ 0.03
BRCA2P51587 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
BRCA2P51587 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
BRCA2P51587 AL137077.1-201ENST00000442115 528 ntBASIC15.24■□□□□ 0.03
BRCA2P51587 AC069421.1-201ENST00000447462 323 ntBASIC15.24■□□□□ 0.03
BRCA2P51587 AC079250.1-201ENST00000456046 531 ntBASIC15.24■□□□□ 0.03
BRCA2P51587 AC092284.1-201ENST00000511386 1289 ntBASIC15.24■□□□□ 0.03
BRCA2P51587 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC15.24■□□□□ 0.03
BRCA2P51587 AP001102.1-201ENST00000528959 409 ntBASIC15.24■□□□□ 0.03
BRCA2P51587 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC15.24■□□□□ 0.03
BRCA2P51587 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
BRCA2P51587 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BRCA2P51587 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BRCA2P51587 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BRCA2P51587 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BRCA2P51587 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
BRCA2P51587 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.24■□□□□ 0.03
BRCA2P51587 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.24■□□□□ 0.03
BRCA2P51587 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
BRCA2P51587 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
BRCA2P51587 RNA5SP84-201ENST00000364740 107 ntBASIC15.24■□□□□ 0.03
BRCA2P51587 RNF7-202ENST00000393000 805 ntTSL 2 BASIC15.24■□□□□ 0.03
BRCA2P51587 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC15.24■□□□□ 0.03
BRCA2P51587 RN7SL22P-201ENST00000471800 269 ntBASIC15.24■□□□□ 0.03
BRCA2P51587 RN7SL477P-201ENST00000488440 286 ntBASIC15.24■□□□□ 0.03
BRCA2P51587 RN7SL2-201ENST00000490232 300 ntBASIC15.24■□□□□ 0.03
BRCA2P51587 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC15.24■□□□□ 0.03
BRCA2P51587 AC009132.1-201ENST00000565194 320 ntBASIC15.24■□□□□ 0.03
BRCA2P51587 HNRNPA1P11-201ENST00000580106 956 ntBASIC15.24■□□□□ 0.03
BRCA2P51587 RN7SL4P-201ENST00000584058 295 ntBASIC15.24■□□□□ 0.03
BRCA2P51587 AC010335.3-201ENST00000623767 531 ntBASIC15.24■□□□□ 0.03
BRCA2P51587 AC099552.4-201ENST00000624248 949 ntBASIC15.24■□□□□ 0.03
BRCA2P51587 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BRCA2P51587 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
BRCA2P51587 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BRCA2P51587 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BRCA2P51587 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.24■□□□□ 0.03
BRCA2P51587 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
BRCA2P51587 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
BRCA2P51587 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BRCA2P51587 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BRCA2P51587 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BRCA2P51587 AC106872.9-201ENST00000512437 1393 ntBASIC15.23■□□□□ 0.03
BRCA2P51587 MAL-202ENST00000349807 705 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
BRCA2P51587 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
BRCA2P51587 MIR7704-201ENST00000610524 59 ntBASIC15.23■□□□□ 0.03
BRCA2P51587 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.23■□□□□ 0.03
BRCA2P51587 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC15.23■□□□□ 0.03
BRCA2P51587 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
BRCA2P51587 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
BRCA2P51587 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
BRCA2P51587 SPINK2-201ENST00000248701 613 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms