Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRE11P49959 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.67■□□□□ 0.26
MRE11P49959 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MRE11P49959 Z97205.2-201ENST00000564697 1639 ntBASIC16.67■□□□□ 0.26
MRE11P49959 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC16.67■□□□□ 0.26
MRE11P49959 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
MRE11P49959 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
MRE11P49959 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MRE11P49959 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC16.66■□□□□ 0.26
MRE11P49959 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MRE11P49959 AL136172.1-201ENST00000598590 1394 ntBASIC16.66■□□□□ 0.26
MRE11P49959 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
MRE11P49959 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
MRE11P49959 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.66■□□□□ 0.26
MRE11P49959 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC16.66■□□□□ 0.26
MRE11P49959 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
MRE11P49959 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRE11P49959 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
MRE11P49959 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRE11P49959 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC16.66■□□□□ 0.26
MRE11P49959 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
MRE11P49959 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRE11P49959 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC16.66■□□□□ 0.26
MRE11P49959 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
MRE11P49959 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRE11P49959 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRE11P49959 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRE11P49959 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MRE11P49959 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.66■□□□□ 0.26
MRE11P49959 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRE11P49959 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.66■□□□□ 0.26
MRE11P49959 CALR4P-201ENST00000431943 946 ntBASIC16.66■□□□□ 0.26
MRE11P49959 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.66■□□□□ 0.26
MRE11P49959 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
MRE11P49959 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.66■□□□□ 0.26
MRE11P49959 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
MRE11P49959 C2orf69P2-201ENST00000562032 1123 ntBASIC16.66■□□□□ 0.26
MRE11P49959 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.66■□□□□ 0.26
MRE11P49959 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.66■□□□□ 0.26
MRE11P49959 AC004790.1-201ENST00000612686 536 ntBASIC16.66■□□□□ 0.26
MRE11P49959 BAP1-211ENST00000615113 489 ntBASIC16.66■□□□□ 0.26
MRE11P49959 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
MRE11P49959 CETN4P-206ENST00000642099 2168 ntBASIC16.66■□□□□ 0.26
MRE11P49959 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
MRE11P49959 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC16.66■□□□□ 0.26
MRE11P49959 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRE11P49959 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MRE11P49959 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.66■□□□□ 0.26
MRE11P49959 ABCD1P2-201ENST00000429313 1601 ntBASIC16.66■□□□□ 0.26
MRE11P49959 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MRE11P49959 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
MRE11P49959 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
MRE11P49959 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRE11P49959 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRE11P49959 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRE11P49959 PDIA3P1-201ENST00000471856 1510 ntBASIC16.65■□□□□ 0.26
MRE11P49959 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MRE11P49959 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRE11P49959 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MRE11P49959 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRE11P49959 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRE11P49959 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC16.65■□□□□ 0.26
MRE11P49959 AC008620.2-201ENST00000510294 1569 ntBASIC16.65■□□□□ 0.26
MRE11P49959 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC16.65■□□□□ 0.26
MRE11P49959 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRE11P49959 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRE11P49959 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
MRE11P49959 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MRE11P49959 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRE11P49959 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.65■□□□□ 0.26
MRE11P49959 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MRE11P49959 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.65■□□□□ 0.26
MRE11P49959 AC003958.1-201ENST00000435883 421 ntBASIC16.65■□□□□ 0.26
MRE11P49959 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.65■□□□□ 0.26
MRE11P49959 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.65■□□□□ 0.26
MRE11P49959 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.65■□□□□ 0.26
MRE11P49959 FO681548.1-201ENST00000455617 1132 ntBASIC16.65■□□□□ 0.26
MRE11P49959 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.65■□□□□ 0.26
MRE11P49959 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.65■□□□□ 0.26
MRE11P49959 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.65■□□□□ 0.26
MRE11P49959 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRE11P49959 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MRE11P49959 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.65■□□□□ 0.26
MRE11P49959 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.65■□□□□ 0.26
MRE11P49959 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.65■□□□□ 0.26
MRE11P49959 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRE11P49959 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRE11P49959 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC16.65■□□□□ 0.26
MRE11P49959 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MRE11P49959 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRE11P49959 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRE11P49959 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.65■□□□□ 0.26
MRE11P49959 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MRE11P49959 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MRE11P49959 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRE11P49959 AC102953.2-201ENST00000609755 3026 ntBASIC16.65■□□□□ 0.26
MRE11P49959 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRE11P49959 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRE11P49959 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRE11P49959 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms