Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 KRT8P4-201ENST00000509735 1454 ntBASIC13□□□□□ -0.33
CENPAP49450 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13□□□□□ -0.33
CENPAP49450 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13□□□□□ -0.33
CENPAP49450 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC13□□□□□ -0.33
CENPAP49450 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CENPAP49450 USP17L6P-201ENST00000382470 1197 ntBASIC13□□□□□ -0.33
CENPAP49450 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13□□□□□ -0.33
CENPAP49450 AL512384.1-201ENST00000406683 331 ntBASIC13□□□□□ -0.33
CENPAP49450 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13□□□□□ -0.33
CENPAP49450 AC004945.1-201ENST00000416738 983 ntBASIC13□□□□□ -0.33
CENPAP49450 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13□□□□□ -0.33
CENPAP49450 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13□□□□□ -0.33
CENPAP49450 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13□□□□□ -0.33
CENPAP49450 COX5BP1-201ENST00000507622 393 ntBASIC13□□□□□ -0.33
CENPAP49450 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13□□□□□ -0.33
CENPAP49450 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CENPAP49450 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13□□□□□ -0.33
CENPAP49450 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13□□□□□ -0.33
CENPAP49450 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13□□□□□ -0.33
CENPAP49450 GNRHR2-203ENST00000581100 1187 ntBASIC13□□□□□ -0.33
CENPAP49450 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13□□□□□ -0.33
CENPAP49450 AC008735.3-201ENST00000596646 500 ntBASIC13□□□□□ -0.33
CENPAP49450 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13□□□□□ -0.33
CENPAP49450 AC244669.2-201ENST00000612320 853 ntBASIC13□□□□□ -0.33
CENPAP49450 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13□□□□□ -0.33
CENPAP49450 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CENPAP49450 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CENPAP49450 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CENPAP49450 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC13□□□□□ -0.33
CENPAP49450 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CENPAP49450 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CENPAP49450 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CENPAP49450 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CENPAP49450 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC13□□□□□ -0.33
CENPAP49450 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13□□□□□ -0.33
CENPAP49450 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13□□□□□ -0.33
CENPAP49450 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CENPAP49450 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CENPAP49450 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CENPAP49450 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
CENPAP49450 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CENPAP49450 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CENPAP49450 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CENPAP49450 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13□□□□□ -0.33
CENPAP49450 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CENPAP49450 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CENPAP49450 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.99□□□□□ -0.33
CENPAP49450 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CENPAP49450 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CENPAP49450 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CENPAP49450 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.99□□□□□ -0.33
CENPAP49450 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.99□□□□□ -0.33
CENPAP49450 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 AC130686.1-201ENST00000622936 2466 ntBASIC12.99□□□□□ -0.33
CENPAP49450 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.99□□□□□ -0.33
CENPAP49450 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.99□□□□□ -0.33
CENPAP49450 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CENPAP49450 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.99□□□□□ -0.33
CENPAP49450 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 AC092933.1-201ENST00000393644 945 ntBASIC12.99□□□□□ -0.33
CENPAP49450 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 MIR1202-201ENST00000408529 83 ntBASIC12.99□□□□□ -0.33
CENPAP49450 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.99□□□□□ -0.33
CENPAP49450 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 TMEM14DP-201ENST00000422205 345 ntBASIC12.99□□□□□ -0.33
CENPAP49450 AL161932.2-201ENST00000435436 679 ntBASIC12.99□□□□□ -0.33
CENPAP49450 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.99□□□□□ -0.33
CENPAP49450 AC007551.1-201ENST00000457394 519 ntBASIC12.99□□□□□ -0.33
CENPAP49450 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.99□□□□□ -0.33
CENPAP49450 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CENPAP49450 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC12.99□□□□□ -0.33
CENPAP49450 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.99□□□□□ -0.33
CENPAP49450 AC078819.1-201ENST00000547454 765 ntBASIC12.99□□□□□ -0.33
CENPAP49450 AC012085.1-201ENST00000548270 765 ntBASIC12.99□□□□□ -0.33
CENPAP49450 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CENPAP49450 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.99□□□□□ -0.33
CENPAP49450 BTNL10-201ENST00000595971 695 ntBASIC12.99□□□□□ -0.33
CENPAP49450 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.99□□□□□ -0.33
CENPAP49450 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.99□□□□□ -0.33
CENPAP49450 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms