Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TNNI2P48788 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
TNNI2P48788 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TNNI2P48788 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.77■□□□□ 0.27
TNNI2P48788 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.77■□□□□ 0.27
TNNI2P48788 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.77■□□□□ 0.27
TNNI2P48788 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TNNI2P48788 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
TNNI2P48788 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNNI2P48788 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNNI2P48788 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNNI2P48788 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNNI2P48788 AL590824.1-201ENST00000403828 1349 ntBASIC16.76■□□□□ 0.27
TNNI2P48788 SHMT1P1-201ENST00000419974 1312 ntBASIC16.76■□□□□ 0.27
TNNI2P48788 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC16.76■□□□□ 0.27
TNNI2P48788 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNNI2P48788 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNNI2P48788 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.76■□□□□ 0.27
TNNI2P48788 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNNI2P48788 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNNI2P48788 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
TNNI2P48788 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNNI2P48788 KRT8P43-201ENST00000406052 1458 ntBASIC16.76■□□□□ 0.27
TNNI2P48788 AC004554.1-201ENST00000422830 1468 ntBASIC16.76■□□□□ 0.27
TNNI2P48788 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNNI2P48788 NIN-202ENST00000324330 4364 ntTSL 5 BASIC16.76■□□□□ 0.27
TNNI2P48788 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNNI2P48788 COX20P1-201ENST00000366529 357 ntBASIC16.76■□□□□ 0.27
TNNI2P48788 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC16.76■□□□□ 0.27
TNNI2P48788 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC16.76■□□□□ 0.27
TNNI2P48788 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC16.76■□□□□ 0.27
TNNI2P48788 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC16.76■□□□□ 0.27
TNNI2P48788 AC244197.1-201ENST00000456494 951 ntBASIC16.76■□□□□ 0.27
TNNI2P48788 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC16.76■□□□□ 0.27
TNNI2P48788 RPS23-207ENST00000511844 530 ntTSL 2 BASIC16.76■□□□□ 0.27
TNNI2P48788 AC100858.1-201ENST00000514059 1228 ntBASIC16.76■□□□□ 0.27
TNNI2P48788 TREHP1-201ENST00000531328 465 ntBASIC16.76■□□□□ 0.27
TNNI2P48788 AC012158.2-201ENST00000536546 354 ntBASIC16.76■□□□□ 0.27
TNNI2P48788 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TNNI2P48788 FOXN3-AS2-201ENST00000554071 1262 ntBASIC16.76■□□□□ 0.27
TNNI2P48788 AL132994.1-201ENST00000554098 400 ntBASIC16.76■□□□□ 0.27
TNNI2P48788 BATF-202ENST00000555504 361 ntTSL 2 BASIC16.76■□□□□ 0.27
TNNI2P48788 MT2A-202ENST00000561491 581 ntTSL 2 BASIC16.76■□□□□ 0.27
TNNI2P48788 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNNI2P48788 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNNI2P48788 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNNI2P48788 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNNI2P48788 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNNI2P48788 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNNI2P48788 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNNI2P48788 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TNNI2P48788 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNNI2P48788 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNNI2P48788 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNNI2P48788 TBC1D27-202ENST00000424239 1573 ntBASIC16.76■□□□□ 0.27
TNNI2P48788 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.76■□□□□ 0.27
TNNI2P48788 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.76■□□□□ 0.27
TNNI2P48788 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNNI2P48788 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNNI2P48788 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNNI2P48788 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC16.75■□□□□ 0.27
TNNI2P48788 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNNI2P48788 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.75■□□□□ 0.27
TNNI2P48788 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNNI2P48788 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TNNI2P48788 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNNI2P48788 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNNI2P48788 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.75■□□□□ 0.27
TNNI2P48788 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC16.75■□□□□ 0.27
TNNI2P48788 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNNI2P48788 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNNI2P48788 OR2W2P-201ENST00000406313 909 ntBASIC16.75■□□□□ 0.27
TNNI2P48788 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNNI2P48788 VENTXP4-201ENST00000449029 958 ntBASIC16.75■□□□□ 0.27
TNNI2P48788 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC16.75■□□□□ 0.27
TNNI2P48788 AC063952.3-201ENST00000467756 308 ntBASIC16.75■□□□□ 0.27
TNNI2P48788 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC16.75■□□□□ 0.27
TNNI2P48788 ALG1L3P-201ENST00000503331 765 ntBASIC16.75■□□□□ 0.27
TNNI2P48788 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC16.75■□□□□ 0.27
TNNI2P48788 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNNI2P48788 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC16.75■□□□□ 0.27
TNNI2P48788 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TNNI2P48788 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC16.75■□□□□ 0.27
TNNI2P48788 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
TNNI2P48788 AC138761.6-201ENST00000583997 1423 ntBASIC16.75■□□□□ 0.27
TNNI2P48788 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNNI2P48788 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNNI2P48788 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNNI2P48788 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNNI2P48788 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.75■□□□□ 0.27
TNNI2P48788 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC16.75■□□□□ 0.27
TNNI2P48788 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TNNI2P48788 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.75■□□□□ 0.27
TNNI2P48788 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC16.75■□□□□ 0.27
TNNI2P48788 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC16.75■□□□□ 0.27
TNNI2P48788 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC16.75■□□□□ 0.27
TNNI2P48788 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNNI2P48788 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.75■□□□□ 0.27
TNNI2P48788 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNNI2P48788 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms