Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TM4SF4P48230 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TM4SF4P48230 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM4SF4P48230 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.67■□□□□ 0.1
TM4SF4P48230 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM4SF4P48230 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM4SF4P48230 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC15.67■□□□□ 0.1
TM4SF4P48230 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
TM4SF4P48230 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM4SF4P48230 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM4SF4P48230 KLK8-203ENST00000347619 555 ntTSL 2 BASIC15.67■□□□□ 0.1
TM4SF4P48230 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM4SF4P48230 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC15.67■□□□□ 0.1
TM4SF4P48230 AL356653.1-201ENST00000402743 360 ntBASIC15.67■□□□□ 0.1
TM4SF4P48230 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC15.67■□□□□ 0.1
TM4SF4P48230 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC15.67■□□□□ 0.1
TM4SF4P48230 HLA-DQB3-203ENST00000425319 356 ntBASIC15.67■□□□□ 0.1
TM4SF4P48230 AKR1C6P-201ENST00000432950 983 ntBASIC15.67■□□□□ 0.1
TM4SF4P48230 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC15.67■□□□□ 0.1
TM4SF4P48230 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TM4SF4P48230 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC15.67■□□□□ 0.1
TM4SF4P48230 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC15.67■□□□□ 0.1
TM4SF4P48230 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TM4SF4P48230 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC15.67■□□□□ 0.1
TM4SF4P48230 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC15.67■□□□□ 0.1
TM4SF4P48230 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC15.67■□□□□ 0.1
TM4SF4P48230 MIR3940-201ENST00000579148 102 ntBASIC15.67■□□□□ 0.1
TM4SF4P48230 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC15.67■□□□□ 0.1
TM4SF4P48230 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC15.67■□□□□ 0.1
TM4SF4P48230 BX510359.7-201ENST00000619819 630 ntBASIC15.67■□□□□ 0.1
TM4SF4P48230 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.67■□□□□ 0.1
TM4SF4P48230 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM4SF4P48230 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM4SF4P48230 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TM4SF4P48230 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TM4SF4P48230 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM4SF4P48230 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.67■□□□□ 0.1
TM4SF4P48230 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM4SF4P48230 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM4SF4P48230 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC15.67■□□□□ 0.1
TM4SF4P48230 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TM4SF4P48230 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
TM4SF4P48230 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM4SF4P48230 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TM4SF4P48230 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM4SF4P48230 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM4SF4P48230 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TM4SF4P48230 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TM4SF4P48230 AC106872.9-201ENST00000512437 1393 ntBASIC15.66■□□□□ 0.1
TM4SF4P48230 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM4SF4P48230 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC15.66■□□□□ 0.1
TM4SF4P48230 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TM4SF4P48230 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TM4SF4P48230 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM4SF4P48230 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TM4SF4P48230 OR7E122P-201ENST00000383606 1017 ntBASIC15.66■□□□□ 0.1
TM4SF4P48230 MARCKSL1P2-201ENST00000401037 976 ntBASIC15.66■□□□□ 0.1
TM4SF4P48230 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC15.66■□□□□ 0.1
TM4SF4P48230 PTPA-219ENST00000435305 530 ntTSL 2 BASIC15.66■□□□□ 0.1
TM4SF4P48230 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC15.66■□□□□ 0.1
TM4SF4P48230 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC15.66■□□□□ 0.1
TM4SF4P48230 RPL35P1-201ENST00000450819 370 ntBASIC15.66■□□□□ 0.1
TM4SF4P48230 TPT1P11-201ENST00000458482 498 ntBASIC15.66■□□□□ 0.1
TM4SF4P48230 RN7SL22P-201ENST00000471800 269 ntBASIC15.66■□□□□ 0.1
TM4SF4P48230 RN7SL452P-201ENST00000482923 291 ntBASIC15.66■□□□□ 0.1
TM4SF4P48230 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC15.66■□□□□ 0.1
TM4SF4P48230 RN7SL646P-201ENST00000492969 297 ntBASIC15.66■□□□□ 0.1
TM4SF4P48230 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC15.66■□□□□ 0.1
TM4SF4P48230 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TM4SF4P48230 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TM4SF4P48230 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC15.66■□□□□ 0.1
TM4SF4P48230 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC15.66■□□□□ 0.1
TM4SF4P48230 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC15.66■□□□□ 0.1
TM4SF4P48230 HNRNPA1P11-201ENST00000580106 956 ntBASIC15.66■□□□□ 0.1
TM4SF4P48230 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM4SF4P48230 AC092535.4-201ENST00000609548 397 ntBASIC15.66■□□□□ 0.1
TM4SF4P48230 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC15.66■□□□□ 0.1
TM4SF4P48230 IMPDH1P5-201ENST00000439688 1540 ntBASIC15.66■□□□□ 0.1
TM4SF4P48230 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM4SF4P48230 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TM4SF4P48230 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC15.66■□□□□ 0.1
TM4SF4P48230 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM4SF4P48230 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.66■□□□□ 0.1
TM4SF4P48230 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.66■□□□□ 0.1
TM4SF4P48230 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM4SF4P48230 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.66■□□□□ 0.1
TM4SF4P48230 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC15.66■□□□□ 0.1
TM4SF4P48230 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM4SF4P48230 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.66■□□□□ 0.1
TM4SF4P48230 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.65■□□□□ 0.1
TM4SF4P48230 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM4SF4P48230 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TM4SF4P48230 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.65■□□□□ 0.1
TM4SF4P48230 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TM4SF4P48230 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM4SF4P48230 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM4SF4P48230 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM4SF4P48230 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms