Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC15.01□□□□□ -0.01
BRCC3P46736 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC15.01□□□□□ -0.01
BRCC3P46736 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC15.01□□□□□ -0.01
BRCC3P46736 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC15.01□□□□□ -0.01
BRCC3P46736 SNORD3B-1-201ENST00000577988 758 ntBASIC15.01□□□□□ -0.01
BRCC3P46736 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC15.01□□□□□ -0.01
BRCC3P46736 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC15.01□□□□□ -0.01
BRCC3P46736 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC15.01□□□□□ -0.01
BRCC3P46736 AC002044.2-201ENST00000624910 970 ntBASIC15.01□□□□□ -0.01
BRCC3P46736 HELLS-212ENST00000630929 400 ntTSL 5 BASIC15.01□□□□□ -0.01
BRCC3P46736 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
BRCC3P46736 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.01□□□□□ -0.01
BRCC3P46736 PHB-210ENST00000511832 1509 ntTSL 2 BASIC15.01□□□□□ -0.01
BRCC3P46736 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.01□□□□□ -0.01
BRCC3P46736 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRCC3P46736 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.01□□□□□ -0.01
BRCC3P46736 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.01□□□□□ -0.01
BRCC3P46736 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRCC3P46736 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.01□□□□□ -0.01
BRCC3P46736 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15□□□□□ -0.01
BRCC3P46736 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC15□□□□□ -0.01
BRCC3P46736 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BRCC3P46736 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15□□□□□ -0.01
BRCC3P46736 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BRCC3P46736 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
BRCC3P46736 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15□□□□□ -0.01
BRCC3P46736 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15□□□□□ -0.01
BRCC3P46736 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
BRCC3P46736 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC15□□□□□ -0.01
BRCC3P46736 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
BRCC3P46736 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15□□□□□ -0.01
BRCC3P46736 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
BRCC3P46736 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
BRCC3P46736 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
BRCC3P46736 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15□□□□□ -0.01
BRCC3P46736 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
BRCC3P46736 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
BRCC3P46736 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
BRCC3P46736 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BRCC3P46736 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BRCC3P46736 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC15□□□□□ -0.01
BRCC3P46736 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC15□□□□□ -0.01
BRCC3P46736 AL627389.1-201ENST00000413508 1182 ntBASIC15□□□□□ -0.01
BRCC3P46736 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
BRCC3P46736 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15□□□□□ -0.01
BRCC3P46736 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC15□□□□□ -0.01
BRCC3P46736 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC15□□□□□ -0.01
BRCC3P46736 IGHV1-12-201ENST00000518307 205 ntBASIC15□□□□□ -0.01
BRCC3P46736 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC15□□□□□ -0.01
BRCC3P46736 AL132994.1-201ENST00000554098 400 ntBASIC15□□□□□ -0.01
BRCC3P46736 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC15□□□□□ -0.01
BRCC3P46736 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC15□□□□□ -0.01
BRCC3P46736 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC15□□□□□ -0.01
BRCC3P46736 ST5-261ENST00000626808 1071 ntTSL 5 BASIC15□□□□□ -0.01
BRCC3P46736 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
BRCC3P46736 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15□□□□□ -0.01
BRCC3P46736 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BRCC3P46736 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15□□□□□ -0.01
BRCC3P46736 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15□□□□□ -0.01
BRCC3P46736 AC152010.1-201ENST00000415779 2006 ntBASIC15□□□□□ -0.01
BRCC3P46736 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BRCC3P46736 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
BRCC3P46736 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BRCC3P46736 AC004554.1-201ENST00000422830 1468 ntBASIC15□□□□□ -0.01
BRCC3P46736 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BRCC3P46736 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BRCC3P46736 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15□□□□□ -0.01
BRCC3P46736 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BRCC3P46736 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC15□□□□□ -0.01
BRCC3P46736 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BRCC3P46736 HSPA7-201ENST00000445535 1927 ntBASIC15□□□□□ -0.01
BRCC3P46736 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BRCC3P46736 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15□□□□□ -0.01
BRCC3P46736 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BRCC3P46736 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
BRCC3P46736 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BRCC3P46736 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
BRCC3P46736 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.99□□□□□ -0.01
BRCC3P46736 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BRCC3P46736 AC015909.5-201ENST00000624336 2266 ntBASIC14.99□□□□□ -0.01
BRCC3P46736 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
BRCC3P46736 AC016397.2-201ENST00000624848 1985 ntBASIC14.99□□□□□ -0.01
BRCC3P46736 RPL13AP19-201ENST00000434320 584 ntBASIC14.99□□□□□ -0.01
BRCC3P46736 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC14.99□□□□□ -0.01
BRCC3P46736 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
BRCC3P46736 AC084752.1-201ENST00000509766 622 ntBASIC14.99□□□□□ -0.01
BRCC3P46736 RN7SKP155-201ENST00000516031 288 ntBASIC14.99□□□□□ -0.01
BRCC3P46736 NT5C-204ENST00000578337 582 ntTSL 2 BASIC14.99□□□□□ -0.01
BRCC3P46736 AL359091.4-201ENST00000610052 409 ntBASIC14.99□□□□□ -0.01
BRCC3P46736 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BRCC3P46736 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BRCC3P46736 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BRCC3P46736 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
BRCC3P46736 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.99□□□□□ -0.01
BRCC3P46736 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
BRCC3P46736 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
BRCC3P46736 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
BRCC3P46736 MST1P2-201ENST00000457982 2291 ntBASIC14.99□□□□□ -0.01
BRCC3P46736 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
BRCC3P46736 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms