Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AC040160.2-201ENST00000623816 1675 ntBASIC16.21■□□□□ 0.19
CLCN1P35523 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN1P35523 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN1P35523 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CLCN1P35523 KRT8P14-201ENST00000414254 1442 ntBASIC16.21■□□□□ 0.19
CLCN1P35523 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCN1P35523 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CLCN1P35523 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCN1P35523 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN1P35523 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN1P35523 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN1P35523 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN1P35523 ABCD1P2-201ENST00000429313 1601 ntBASIC16.21■□□□□ 0.19
CLCN1P35523 LINC01165-201ENST00000445190 1623 ntBASIC16.21■□□□□ 0.19
CLCN1P35523 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCN1P35523 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CLCN1P35523 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN1P35523 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN1P35523 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCN1P35523 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN1P35523 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CLCN1P35523 PIN1P1-201ENST00000412108 996 ntBASIC16.21■□□□□ 0.19
CLCN1P35523 AL691447.1-201ENST00000419456 387 ntBASIC16.21■□□□□ 0.19
CLCN1P35523 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN1P35523 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC16.21■□□□□ 0.19
CLCN1P35523 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN1P35523 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CLCN1P35523 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CLCN1P35523 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CLCN1P35523 AC190387.1-201ENST00000551683 408 ntBASIC16.21■□□□□ 0.19
CLCN1P35523 WASH4P-201ENST00000564273 1246 ntBASIC16.21■□□□□ 0.19
CLCN1P35523 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.21■□□□□ 0.19
CLCN1P35523 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CLCN1P35523 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.21■□□□□ 0.19
CLCN1P35523 WFDC1-204ENST00000613603 549 ntBASIC16.21■□□□□ 0.19
CLCN1P35523 MSNP1-201ENST00000511640 1732 ntBASIC16.21■□□□□ 0.19
CLCN1P35523 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC16.21■□□□□ 0.19
CLCN1P35523 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CLCN1P35523 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN1P35523 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLCN1P35523 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLCN1P35523 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CLCN1P35523 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.21■□□□□ 0.18
CLCN1P35523 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCN1P35523 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCN1P35523 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN1P35523 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN1P35523 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN1P35523 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN1P35523 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
CLCN1P35523 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN1P35523 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCN1P35523 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CLCN1P35523 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN1P35523 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CLCN1P35523 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN1P35523 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN1P35523 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.2■□□□□ 0.18
CLCN1P35523 AC092028.1-202ENST00000641483 3547 ntBASIC16.2■□□□□ 0.18
CLCN1P35523 AC092028.1-201ENST00000641781 3540 ntBASIC16.2■□□□□ 0.18
CLCN1P35523 LPP-AS2-201ENST00000605573 2852 ntBASIC16.2■□□□□ 0.18
CLCN1P35523 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN1P35523 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN1P35523 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN1P35523 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN1P35523 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.2■□□□□ 0.18
CLCN1P35523 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CLCN1P35523 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CLCN1P35523 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CLCN1P35523 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN1P35523 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCN1P35523 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.2■□□□□ 0.18
CLCN1P35523 CLUHP6-201ENST00000580789 941 ntBASIC16.2■□□□□ 0.18
CLCN1P35523 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCN1P35523 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CLCN1P35523 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN1P35523 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN1P35523 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN1P35523 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CLCN1P35523 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN1P35523 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN1P35523 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN1P35523 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN1P35523 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CLCN1P35523 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.2■□□□□ 0.18
CLCN1P35523 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN1P35523 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC16.2■□□□□ 0.18
CLCN1P35523 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCN1P35523 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN1P35523 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN1P35523 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC16.19■□□□□ 0.18
CLCN1P35523 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN1P35523 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN1P35523 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN1P35523 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
CLCN1P35523 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCN1P35523 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN1P35523 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN1P35523 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CLCN1P35523 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms