Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC12.22□□□□□ -0.45
CD40P25942 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
CD40P25942 LINC00265-2P-201ENST00000413372 782 ntBASIC12.22□□□□□ -0.45
CD40P25942 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC12.22□□□□□ -0.45
CD40P25942 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC12.22□□□□□ -0.45
CD40P25942 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC12.22□□□□□ -0.45
CD40P25942 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC12.22□□□□□ -0.45
CD40P25942 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 SCARNA12-201ENST00000459155 270 ntBASIC12.22□□□□□ -0.45
CD40P25942 RN7SL8P-201ENST00000461771 266 ntBASIC12.22□□□□□ -0.45
CD40P25942 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.22□□□□□ -0.45
CD40P25942 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CD40P25942 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 OR5BD1P-201ENST00000532527 817 ntBASIC12.22□□□□□ -0.45
CD40P25942 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC12.22□□□□□ -0.45
CD40P25942 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC12.22□□□□□ -0.45
CD40P25942 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.22□□□□□ -0.45
CD40P25942 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC12.22□□□□□ -0.45
CD40P25942 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.22□□□□□ -0.45
CD40P25942 NUDT4P2-201ENST00000578341 546 ntBASIC12.22□□□□□ -0.45
CD40P25942 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
CD40P25942 MIR5572-201ENST00000583188 137 ntBASIC12.22□□□□□ -0.45
CD40P25942 MIR2392-201ENST00000584881 84 ntBASIC12.22□□□□□ -0.45
CD40P25942 AP000322.3-201ENST00000608665 388 ntBASIC12.22□□□□□ -0.45
CD40P25942 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.22□□□□□ -0.45
CD40P25942 AC025262.2-201ENST00000623975 1056 ntBASIC12.22□□□□□ -0.45
CD40P25942 SNX1-214ENST00000625244 324 ntTSL 5 BASIC12.22□□□□□ -0.45
CD40P25942 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.22□□□□□ -0.45
CD40P25942 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.22□□□□□ -0.45
CD40P25942 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 AC005912.2-201ENST00000619492 2400 ntBASIC12.22□□□□□ -0.45
CD40P25942 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.22□□□□□ -0.45
CD40P25942 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CD40P25942 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
CD40P25942 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
CD40P25942 MIR193BHG-211ENST00000641433 5365 ntBASIC12.22□□□□□ -0.45
CD40P25942 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
CD40P25942 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD40P25942 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD40P25942 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CD40P25942 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
CD40P25942 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD40P25942 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.21□□□□□ -0.45
CD40P25942 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.21□□□□□ -0.45
CD40P25942 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
CD40P25942 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CD40P25942 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD40P25942 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD40P25942 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
CD40P25942 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD40P25942 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD40P25942 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CD40P25942 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD40P25942 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CD40P25942 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.21□□□□□ -0.45
CD40P25942 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.21□□□□□ -0.45
CD40P25942 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
CD40P25942 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.21□□□□□ -0.45
CD40P25942 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD40P25942 PYY2-201ENST00000315776 282 ntBASIC12.21□□□□□ -0.45
CD40P25942 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD40P25942 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CD40P25942 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD40P25942 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC12.21□□□□□ -0.45
CD40P25942 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC12.21□□□□□ -0.45
CD40P25942 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CD40P25942 RPL18AP3-201ENST00000462885 528 ntBASIC12.21□□□□□ -0.45
CD40P25942 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD40P25942 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.21□□□□□ -0.45
CD40P25942 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC12.21□□□□□ -0.45
CD40P25942 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC12.21□□□□□ -0.45
CD40P25942 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD40P25942 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.21□□□□□ -0.45
CD40P25942 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC12.21□□□□□ -0.45
CD40P25942 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC12.21□□□□□ -0.45
CD40P25942 RN7SL455P-201ENST00000580629 282 ntBASIC12.21□□□□□ -0.45
CD40P25942 MIR3180-2-201ENST00000581748 88 ntBASIC12.21□□□□□ -0.45
CD40P25942 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.21□□□□□ -0.45
CD40P25942 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.21□□□□□ -0.45
CD40P25942 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC12.21□□□□□ -0.45
CD40P25942 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CD40P25942 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC12.21□□□□□ -0.45
CD40P25942 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD40P25942 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.21□□□□□ -0.45
CD40P25942 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CD40P25942 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.21□□□□□ -0.46
CD40P25942 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms