Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.36□□□□□ -0.27
CHMP24386 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.36□□□□□ -0.27
CHMP24386 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP24386 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP24386 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CHMP24386 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CHMP24386 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CHMP24386 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP24386 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CHMP24386 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP24386 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP24386 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP24386 KRT8P29-201ENST00000420409 1371 ntBASIC13.35□□□□□ -0.27
CHMP24386 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
CHMP24386 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.35□□□□□ -0.27
CHMP24386 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP24386 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.35□□□□□ -0.27
CHMP24386 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CHMP24386 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP24386 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP24386 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP24386 MIR1247-201ENST00000408206 136 ntBASIC13.35□□□□□ -0.27
CHMP24386 GPAA1P2-201ENST00000417923 928 ntBASIC13.35□□□□□ -0.27
CHMP24386 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.35□□□□□ -0.27
CHMP24386 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.35□□□□□ -0.27
CHMP24386 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP24386 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP24386 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.35□□□□□ -0.27
CHMP24386 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.35□□□□□ -0.27
CHMP24386 AC126915.1-201ENST00000522847 1038 ntBASIC13.35□□□□□ -0.27
CHMP24386 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CHMP24386 AC100827.2-201ENST00000563214 1194 ntBASIC13.35□□□□□ -0.27
CHMP24386 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.35□□□□□ -0.27
CHMP24386 AC009955.4-201ENST00000597192 544 ntBASIC13.35□□□□□ -0.27
CHMP24386 AC007663.3-201ENST00000609632 465 ntBASIC13.35□□□□□ -0.27
CHMP24386 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.35□□□□□ -0.27
CHMP24386 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.35□□□□□ -0.27
CHMP24386 AC027601.3-201ENST00000622907 509 ntBASIC13.35□□□□□ -0.27
CHMP24386 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.35□□□□□ -0.27
CHMP24386 AC244452.3-201ENST00000636814 210 ntBASIC13.35□□□□□ -0.27
CHMP24386 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP24386 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP24386 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP24386 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.35□□□□□ -0.27
CHMP24386 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.35□□□□□ -0.27
CHMP24386 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP24386 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.35□□□□□ -0.27
CHMP24386 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP24386 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP24386 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CHMP24386 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CHMP24386 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CHMP24386 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP24386 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.34□□□□□ -0.27
CHMP24386 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
CHMP24386 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP24386 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.34□□□□□ -0.27
CHMP24386 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP24386 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP24386 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CHMP24386 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP24386 AC131212.3-201ENST00000624087 4219 ntBASIC13.34□□□□□ -0.27
CHMP24386 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP24386 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP24386 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CHMP24386 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP24386 AL590440.2-201ENST00000641973 1595 ntBASIC13.34□□□□□ -0.27
CHMP24386 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP24386 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.34□□□□□ -0.27
CHMP24386 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.34□□□□□ -0.27
CHMP24386 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
CHMP24386 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.34□□□□□ -0.27
CHMP24386 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CHMP24386 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CHMP24386 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP24386 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CHMP24386 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.34□□□□□ -0.27
CHMP24386 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.34□□□□□ -0.27
CHMP24386 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.34□□□□□ -0.27
CHMP24386 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.34□□□□□ -0.27
CHMP24386 AC021723.1-201ENST00000486306 515 ntBASIC13.34□□□□□ -0.27
CHMP24386 AC091804.1-201ENST00000486888 567 ntBASIC13.34□□□□□ -0.27
CHMP24386 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP24386 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.34□□□□□ -0.27
CHMP24386 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms