Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SRRM4A7MD48 RCC2P1-201ENST00000452257 1476 ntBASIC11.45□□□□□ -0.58
SRRM4A7MD48 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SRRM4A7MD48 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 AC131212.3-201ENST00000624087 4219 ntBASIC11.45□□□□□ -0.58
SRRM4A7MD48 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 GALC-206ENST00000544807 2528 ntTSL 2 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SRRM4A7MD48 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SRRM4A7MD48 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SRRM4A7MD48 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
SRRM4A7MD48 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SRRM4A7MD48 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 AL590824.1-201ENST00000403828 1349 ntBASIC11.45□□□□□ -0.58
SRRM4A7MD48 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SRRM4A7MD48 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SRRM4A7MD48 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SRRM4A7MD48 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SRRM4A7MD48 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SRRM4A7MD48 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SRRM4A7MD48 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 GOLGA2P4-201ENST00000441462 777 ntBASIC11.45□□□□□ -0.58
SRRM4A7MD48 RPL13AP20-201ENST00000459725 609 ntBASIC11.45□□□□□ -0.58
SRRM4A7MD48 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 CD74-212ENST00000524315 584 ntTSL 5 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 KLK3-211ENST00000597483 810 ntTSL 2 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 AC017083.2-201ENST00000608069 979 ntBASIC11.45□□□□□ -0.58
SRRM4A7MD48 MIR6805-201ENST00000615055 62 ntBASIC11.45□□□□□ -0.58
SRRM4A7MD48 AL023803.2-201ENST00000620080 638 ntBASIC11.45□□□□□ -0.58
SRRM4A7MD48 CR392039.2-201ENST00000623182 509 ntBASIC11.45□□□□□ -0.58
SRRM4A7MD48 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SRRM4A7MD48 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
SRRM4A7MD48 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SRRM4A7MD48 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SRRM4A7MD48 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 PEG13-201ENST00000631594 5667 ntBASIC11.45□□□□□ -0.58
SRRM4A7MD48 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SRRM4A7MD48 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SRRM4A7MD48 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SRRM4A7MD48 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SRRM4A7MD48 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SRRM4A7MD48 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SRRM4A7MD48 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
SRRM4A7MD48 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC11.44□□□□□ -0.58
SRRM4A7MD48 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC11.44□□□□□ -0.58
SRRM4A7MD48 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
SRRM4A7MD48 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC11.44□□□□□ -0.58
SRRM4A7MD48 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 AC099521.3-201ENST00000624251 2938 ntBASIC11.44□□□□□ -0.58
SRRM4A7MD48 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC11.44□□□□□ -0.58
SRRM4A7MD48 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 TUBB4AP1-201ENST00000450755 1325 ntBASIC11.44□□□□□ -0.58
SRRM4A7MD48 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SRRM4A7MD48 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
SRRM4A7MD48 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 BTBD6P1-201ENST00000412176 1267 ntBASIC11.44□□□□□ -0.58
SRRM4A7MD48 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC11.44□□□□□ -0.58
SRRM4A7MD48 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms