Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 AC009542.2-202ENST00000619004 1067 ntBASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 AL162426.1-201ENST00000624141 743 ntBASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 AL008718.2-201ENST00000609206 1313 ntBASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 STRCP1-201ENST00000509801 5328 ntBASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 TMBIM7P-202ENST00000641474 1516 ntBASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 HSPA8P5-201ENST00000456928 2069 ntBASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 GK-202ENST00000378941 458 ntTSL 3 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 HSPB1P2-201ENST00000448722 546 ntBASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 BNIP3P42-201ENST00000454982 569 ntBASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 RN7SL560P-201ENST00000577943 264 ntBASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 MIR4259-201ENST00000584466 101 ntBASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 BNIP3P29-201ENST00000598302 571 ntBASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 AC011447.5-201ENST00000616168 564 ntBASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 RPL35-206ENST00000629845 340 ntTSL 5 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 AC019294.4-201ENST00000561777 2905 ntBASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 FP325330.2-201ENST00000624219 5630 ntBASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 TUBB8P4-201ENST00000511806 1324 ntBASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 FAS-202ENST00000352159 1722 ntTSL 5 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
HLA-DRB4X5D2U9 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
HLA-DRB4X5D2U9 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC10.77□□□□□ -0.68
HLA-DRB4X5D2U9 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
HLA-DRB4X5D2U9 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
HLA-DRB4X5D2U9 AC068760.1-201ENST00000493579 1953 ntBASIC10.77□□□□□ -0.68
HLA-DRB4X5D2U9 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
HLA-DRB4X5D2U9 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
HLA-DRB4X5D2U9 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms