Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 AL354989.2-201ENST00000435838 1540 ntBASIC12.74□□□□□ -0.37
COPS3Q9UNS2 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 AC010141.1-201ENST00000411585 623 ntBASIC12.74□□□□□ -0.37
COPS3Q9UNS2 AP006294.1-201ENST00000415407 339 ntBASIC12.74□□□□□ -0.37
COPS3Q9UNS2 C2orf27AP3-201ENST00000434123 579 ntBASIC12.74□□□□□ -0.37
COPS3Q9UNS2 AK2P2-201ENST00000439142 405 ntBASIC12.74□□□□□ -0.37
COPS3Q9UNS2 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 RN7SL837P-201ENST00000463010 287 ntBASIC12.74□□□□□ -0.37
COPS3Q9UNS2 FTH1P14-201ENST00000482930 551 ntBASIC12.74□□□□□ -0.37
COPS3Q9UNS2 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 USP32P1-208ENST00000506594 1164 ntBASIC12.74□□□□□ -0.37
COPS3Q9UNS2 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 AL354718.3-201ENST00000616414 581 ntBASIC12.74□□□□□ -0.37
COPS3Q9UNS2 CR382287.1-201ENST00000623954 586 ntBASIC12.74□□□□□ -0.37
COPS3Q9UNS2 AC006453.4-201ENST00000636949 1252 ntBASIC12.74□□□□□ -0.37
COPS3Q9UNS2 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 PDIA3P1-201ENST00000471856 1510 ntBASIC12.73□□□□□ -0.37
COPS3Q9UNS2 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 KRT8P4-201ENST00000509735 1454 ntBASIC12.73□□□□□ -0.37
COPS3Q9UNS2 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 MIR326-201ENST00000362220 95 ntBASIC12.73□□□□□ -0.37
COPS3Q9UNS2 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 INE1-201ENST00000456273 945 ntBASIC12.73□□□□□ -0.37
COPS3Q9UNS2 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 SLC25A47P1-201ENST00000531577 414 ntBASIC12.73□□□□□ -0.37
COPS3Q9UNS2 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 MIR4745-201ENST00000577608 62 ntBASIC12.73□□□□□ -0.37
COPS3Q9UNS2 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 AC138951.2-201ENST00000623455 1161 ntBASIC12.73□□□□□ -0.37
COPS3Q9UNS2 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms