Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 AL590440.2-201ENST00000641973 1595 ntBASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 AC099336.1-201ENST00000417053 1171 ntBASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 AC021723.1-201ENST00000486306 515 ntBASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 PUDP-206ENST00000540122 825 ntTSL 2 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 DERL2-202ENST00000570848 657 ntTSL 5 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 RN7SL560P-201ENST00000577943 264 ntBASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 CYGB-203ENST00000589145 788 ntTSL 3 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 AC132192.2-201ENST00000596206 1147 ntBASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 MTHFR-210ENST00000641407 2387 ntBASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 KHSRPP1-201ENST00000427983 1768 ntBASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
LINC00474Q9P2X8 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 INE2-201ENST00000630399 1874 ntBASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 AC140479.7-201ENST00000636301 2332 ntBASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms