Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRMT13Q9NUP7 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRMT13Q9NUP7 AC068760.1-201ENST00000493579 1953 ntBASIC15.42■□□□□ 0.06
TRMT13Q9NUP7 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRMT13Q9NUP7 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRMT13Q9NUP7 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 AC126177.1-201ENST00000547829 2218 ntBASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 RHOC-205ENST00000369636 786 ntTSL 2 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 HNRNPA1P58-201ENST00000403629 610 ntBASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 RN7SL128P-201ENST00000467883 305 ntBASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 RN7SL351P-201ENST00000469306 248 ntBASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 AC005777.1-201ENST00000588332 187 ntBASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 AL590824.1-201ENST00000403828 1349 ntBASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRMT13Q9NUP7 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 AC106827.1-201ENST00000366454 431 ntBASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 OR10N1P-201ENST00000392758 869 ntBASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 AF274858.1-201ENST00000406288 372 ntBASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 AC092570.1-201ENST00000414446 469 ntBASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 AC104961.1-201ENST00000427605 771 ntBASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 EEF1DP2-201ENST00000433698 843 ntBASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 NME6-208ENST00000435684 599 ntTSL 2 BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 IGHEP2-201ENST00000519308 1256 ntBASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 KNOP1P1-201ENST00000542108 989 ntBASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 AL359219.1-201ENST00000556311 934 ntBASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRMT13Q9NUP7 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms