Protein–RNA interactions for Protein: Q8NFY4

SEMA6D, Semaphorin-6D, humanhuman

Predictions only

Length 1,073 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6DQ8NFY4 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 Z93015.1-201ENST00000451718 390 ntBASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 AL021578.1-201ENST00000613646 709 ntBASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 AL022313.4-201ENST00000562756 2046 ntBASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 AL157996.1-201ENST00000624684 2299 ntBASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 AC105206.1-202ENST00000314927 2368 ntBASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SEMA6DQ8NFY4 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 CHMP1AP1-201ENST00000445563 662 ntBASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 HOMER2P2-201ENST00000451621 847 ntBASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
SEMA6DQ8NFY4 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEMA6DQ8NFY4 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.53□□□□□ -0.4
SEMA6DQ8NFY4 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEMA6DQ8NFY4 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SEMA6DQ8NFY4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms