Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.84□□□□□ -0.35
BBS1Q8NFJ9 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.84□□□□□ -0.35
BBS1Q8NFJ9 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
BBS1Q8NFJ9 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
BBS1Q8NFJ9 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
BBS1Q8NFJ9 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
BBS1Q8NFJ9 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
BBS1Q8NFJ9 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.83□□□□□ -0.35
BBS1Q8NFJ9 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.83□□□□□ -0.35
BBS1Q8NFJ9 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
BBS1Q8NFJ9 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
BBS1Q8NFJ9 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
BBS1Q8NFJ9 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 PCDHA5-203ENST00000614258 4248 ntBASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 SHC1P1-201ENST00000425230 1745 ntBASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 E2F3P2-201ENST00000447755 1422 ntBASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 C2orf27AP3-201ENST00000434123 579 ntBASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 AL645933.1-201ENST00000440087 609 ntBASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 BCRP1-201ENST00000444246 691 ntBASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 AL354718.3-201ENST00000616414 581 ntBASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 AC138951.2-201ENST00000623455 1161 ntBASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 CR382287.1-201ENST00000623954 586 ntBASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 MKRN5P-201ENST00000445263 1467 ntBASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 LAP3P2-201ENST00000454686 1454 ntBASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
BBS1Q8NFJ9 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 AP000437.1-201ENST00000624057 2085 ntBASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 AC005229.1-201ENST00000392885 409 ntBASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 FTH1P14-201ENST00000482930 551 ntBASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 AC006453.4-201ENST00000636949 1252 ntBASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 AL031719.1-201ENST00000623365 2587 ntBASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BBS1Q8NFJ9 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms