Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 PHB-210ENST00000511832 1509 ntTSL 2 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 AOC4P-203ENST00000566825 2289 ntBASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 LINC00638-201ENST00000555578 2518 ntBASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 CDH1-212ENST00000611625 4878 ntTSL 5 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 AC012313.8-201ENST00000595059 5402 ntBASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 ESR1-201ENST00000206249 6458 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 AC002350.2-201ENST00000623894 1828 ntBASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 ADCY1-201ENST00000297323 12503 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 GOLGA8EP-201ENST00000530246 1959 ntBASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 FLJ30679-201ENST00000624773 1980 ntBASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 TBC1D27-201ENST00000261651 4838 ntTSL 2 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 AC080128.2-201ENST00000641520 11863 ntBASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 AC022364.1-202ENST00000617468 2409 ntBASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 TUBGCP4-208ENST00000564079 6798 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 MIR574-201ENST00000385209 96 ntBASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 KLK3-207ENST00000595952 969 ntTSL 3 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
KCNIP4Q6PIL6 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 VWC2-201ENST00000340652 11299 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
KCNIP4Q6PIL6 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms