Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RDM1-219ENST00000615378 542 ntTSL 3 BASIC15.1■□□□□ 0.01
VARS2Q5ST30 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
VARS2Q5ST30 AC093648.1-201ENST00000623546 606 ntBASIC15.1■□□□□ 0.01
VARS2Q5ST30 AC148477.9-201ENST00000623974 539 ntBASIC15.1■□□□□ 0.01
VARS2Q5ST30 AL031430.1-201ENST00000642067 1039 ntBASIC15.1■□□□□ 0.01
VARS2Q5ST30 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.1■□□□□ 0.01
VARS2Q5ST30 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
VARS2Q5ST30 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.1■□□□□ 0.01
VARS2Q5ST30 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
VARS2Q5ST30 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.1■□□□□ 0.01
VARS2Q5ST30 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
VARS2Q5ST30 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
VARS2Q5ST30 AC012617.1-204ENST00000586340 2305 ntBASIC15.1■□□□□ 0.01
VARS2Q5ST30 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
VARS2Q5ST30 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VARS2Q5ST30 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VARS2Q5ST30 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
VARS2Q5ST30 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VARS2Q5ST30 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
VARS2Q5ST30 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
VARS2Q5ST30 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VARS2Q5ST30 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VARS2Q5ST30 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VARS2Q5ST30 SNX18-202ENST00000343017 3140 ntBASIC15.09■□□□□ 0.01
VARS2Q5ST30 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 HSPA8P5-201ENST00000456928 2069 ntBASIC15.09■□□□□ 0.01
VARS2Q5ST30 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VARS2Q5ST30 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VARS2Q5ST30 AC246787.1-201ENST00000392301 627 ntBASIC15.09■□□□□ 0.01
VARS2Q5ST30 AC103592.1-201ENST00000394513 664 ntBASIC15.09■□□□□ 0.01
VARS2Q5ST30 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 PPP1R2P4-201ENST00000424051 595 ntBASIC15.09■□□□□ 0.01
VARS2Q5ST30 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 BUD31-205ENST00000456893 512 ntTSL 5 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 SCARNA12-201ENST00000459155 270 ntBASIC15.09■□□□□ 0.01
VARS2Q5ST30 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 AP003398.1-201ENST00000531124 318 ntBASIC15.09■□□□□ 0.01
VARS2Q5ST30 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 AC146944.4-201ENST00000602697 718 ntBASIC15.09■□□□□ 0.01
VARS2Q5ST30 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 CCNT2P1-201ENST00000423082 1315 ntBASIC15.09■□□□□ 0.01
VARS2Q5ST30 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VARS2Q5ST30 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VARS2Q5ST30 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VARS2Q5ST30 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
VARS2Q5ST30 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VARS2Q5ST30 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VARS2Q5ST30 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
VARS2Q5ST30 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VARS2Q5ST30 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VARS2Q5ST30 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
VARS2Q5ST30 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.08■□□□□ 0.01
VARS2Q5ST30 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.08■□□□□ 0.01
VARS2Q5ST30 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.08■□□□□ 0.01
VARS2Q5ST30 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
VARS2Q5ST30 RPL13AP3-202ENST00000494676 1473 ntBASIC15.08■□□□□ 0.01
VARS2Q5ST30 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms