Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 PYY2-201ENST00000315776 282 ntBASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 AC098934.1-203ENST00000442868 1262 ntBASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 GDNF-207ENST00000515058 764 ntTSL 5 BASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 RNA5SP406-201ENST00000516106 112 ntBASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 AC010632.2-201ENST00000588369 1224 ntBASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 AP005264.6-204ENST00000588436 719 ntBASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 CYP4F36P-201ENST00000589193 186 ntBASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 AC026790.2-201ENST00000606282 430 ntBASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 AC006483.2-201ENST00000609813 515 ntBASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 MME-218ENST00000625667 363 ntTSL 5 BASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 HELLS-212ENST00000630929 400 ntTSL 5 BASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 MST1P2-201ENST00000457982 2291 ntBASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTC1Q2NKJ3 AC068587.6-202ENST00000641839 5619 ntBASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 AC004554.1-201ENST00000422830 1468 ntBASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 AC092580.1-201ENST00000433998 658 ntBASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 AC026470.1-201ENST00000478038 846 ntBASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 RN7SL582P-201ENST00000491078 279 ntBASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CTC1Q2NKJ3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms