Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.83□□□□□ -0.36
CDK5Q00535 BCRP6-201ENST00000510112 632 ntBASIC12.83□□□□□ -0.36
CDK5Q00535 BCRP7-201ENST00000511549 544 ntBASIC12.83□□□□□ -0.36
CDK5Q00535 AC003686.1-201ENST00000550956 1034 ntBASIC12.83□□□□□ -0.36
CDK5Q00535 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDK5Q00535 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.83□□□□□ -0.36
CDK5Q00535 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CDK5Q00535 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.83□□□□□ -0.36
CDK5Q00535 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.83□□□□□ -0.36
CDK5Q00535 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC12.83□□□□□ -0.36
CDK5Q00535 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.83□□□□□ -0.36
CDK5Q00535 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.83□□□□□ -0.36
CDK5Q00535 AC138951.2-201ENST00000623455 1161 ntBASIC12.83□□□□□ -0.36
CDK5Q00535 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CDK5Q00535 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.83□□□□□ -0.36
CDK5Q00535 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDK5Q00535 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CDK5Q00535 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDK5Q00535 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDK5Q00535 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDK5Q00535 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDK5Q00535 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDK5Q00535 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.83□□□□□ -0.36
CDK5Q00535 AL031595.1-201ENST00000623969 4709 ntBASIC12.83□□□□□ -0.36
CDK5Q00535 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDK5Q00535 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDK5Q00535 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDK5Q00535 DMBT1P1-203ENST00000636837 4628 ntBASIC12.83□□□□□ -0.36
CDK5Q00535 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDK5Q00535 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDK5Q00535 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDK5Q00535 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDK5Q00535 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDK5Q00535 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.83□□□□□ -0.36
CDK5Q00535 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDK5Q00535 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDK5Q00535 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDK5Q00535 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CDK5Q00535 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.82□□□□□ -0.36
CDK5Q00535 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
CDK5Q00535 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CDK5Q00535 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.82□□□□□ -0.36
CDK5Q00535 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 FMO6P-201ENST00000236166 1620 ntBASIC12.82□□□□□ -0.36
CDK5Q00535 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
CDK5Q00535 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 AC236430.1-201ENST00000402231 743 ntBASIC12.82□□□□□ -0.36
CDK5Q00535 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC12.82□□□□□ -0.36
CDK5Q00535 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.82□□□□□ -0.36
CDK5Q00535 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.82□□□□□ -0.36
CDK5Q00535 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.82□□□□□ -0.36
CDK5Q00535 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 USP32P1-208ENST00000506594 1164 ntBASIC12.82□□□□□ -0.36
CDK5Q00535 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.82□□□□□ -0.36
CDK5Q00535 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.82□□□□□ -0.36
CDK5Q00535 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.82□□□□□ -0.36
CDK5Q00535 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 AC244669.2-201ENST00000612320 853 ntBASIC12.82□□□□□ -0.36
CDK5Q00535 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.82□□□□□ -0.36
CDK5Q00535 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.82□□□□□ -0.36
CDK5Q00535 PCDHA5-203ENST00000614258 4248 ntBASIC12.82□□□□□ -0.36
CDK5Q00535 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.82□□□□□ -0.36
CDK5Q00535 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
CDK5Q00535 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.82□□□□□ -0.36
CDK5Q00535 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
CDK5Q00535 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.82□□□□□ -0.36
CDK5Q00535 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDK5Q00535 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CDK5Q00535 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.81□□□□□ -0.36
CDK5Q00535 ZNF493-208ENST00000599461 1769 ntBASIC12.81□□□□□ -0.36
CDK5Q00535 AGGF1P10-201ENST00000635005 2191 ntBASIC12.81□□□□□ -0.36
CDK5Q00535 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CDK5Q00535 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
CDK5Q00535 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDK5Q00535 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
CDK5Q00535 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CDK5Q00535 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms