Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3AP56704 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3AP56704 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3AP56704 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.35□□□□□ -0.11
WNT3AP56704 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
WNT3AP56704 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.35□□□□□ -0.11
WNT3AP56704 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.35□□□□□ -0.11
WNT3AP56704 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3AP56704 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3AP56704 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
WNT3AP56704 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3AP56704 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3AP56704 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
WNT3AP56704 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.34□□□□□ -0.11
WNT3AP56704 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
WNT3AP56704 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
WNT3AP56704 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.34□□□□□ -0.11
WNT3AP56704 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.34□□□□□ -0.11
WNT3AP56704 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
WNT3AP56704 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.34□□□□□ -0.11
WNT3AP56704 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.34□□□□□ -0.11
WNT3AP56704 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 AC239868.1-201ENST00000369385 493 ntBASIC14.34□□□□□ -0.11
WNT3AP56704 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.34□□□□□ -0.11
WNT3AP56704 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.34□□□□□ -0.11
WNT3AP56704 OR8T1P-201ENST00000421347 918 ntBASIC14.34□□□□□ -0.11
WNT3AP56704 AC244107.1-201ENST00000442033 332 ntBASIC14.34□□□□□ -0.11
WNT3AP56704 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 DUX4L50-201ENST00000455245 715 ntBASIC14.34□□□□□ -0.11
WNT3AP56704 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.34□□□□□ -0.11
WNT3AP56704 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.34□□□□□ -0.11
WNT3AP56704 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.34□□□□□ -0.11
WNT3AP56704 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.34□□□□□ -0.11
WNT3AP56704 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
WNT3AP56704 AC100757.4-201ENST00000626934 759 ntBASIC14.34□□□□□ -0.11
WNT3AP56704 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
WNT3AP56704 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
WNT3AP56704 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.34□□□□□ -0.11
WNT3AP56704 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 AL139158.3-201ENST00000641212 1562 ntBASIC14.34□□□□□ -0.11
WNT3AP56704 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
WNT3AP56704 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3AP56704 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
WNT3AP56704 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
WNT3AP56704 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
WNT3AP56704 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.33□□□□□ -0.12
WNT3AP56704 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3AP56704 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
WNT3AP56704 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3AP56704 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
WNT3AP56704 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.33□□□□□ -0.12
WNT3AP56704 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.33□□□□□ -0.12
WNT3AP56704 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3AP56704 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3AP56704 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
WNT3AP56704 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.33□□□□□ -0.12
WNT3AP56704 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3AP56704 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3AP56704 MIR1247-201ENST00000408206 136 ntBASIC14.33□□□□□ -0.12
WNT3AP56704 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3AP56704 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3AP56704 KRT8P13-201ENST00000463294 1010 ntBASIC14.33□□□□□ -0.12
WNT3AP56704 CHCHD2P2-201ENST00000503744 321 ntBASIC14.33□□□□□ -0.12
WNT3AP56704 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.33□□□□□ -0.12
WNT3AP56704 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.33□□□□□ -0.12
WNT3AP56704 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.33□□□□□ -0.12
WNT3AP56704 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
WNT3AP56704 AC244452.3-201ENST00000636814 210 ntBASIC14.33□□□□□ -0.12
WNT3AP56704 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3AP56704 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3AP56704 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3AP56704 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.33□□□□□ -0.12
WNT3AP56704 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms