Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CAV3P56539 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CAV3P56539 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
CAV3P56539 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
CAV3P56539 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CAV3P56539 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.76□□□□□ -0.37
CAV3P56539 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.76□□□□□ -0.37
CAV3P56539 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.76□□□□□ -0.37
CAV3P56539 RN7SL692P-201ENST00000464677 288 ntBASIC12.76□□□□□ -0.37
CAV3P56539 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.76□□□□□ -0.37
CAV3P56539 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.76□□□□□ -0.37
CAV3P56539 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC12.76□□□□□ -0.37
CAV3P56539 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.76□□□□□ -0.37
CAV3P56539 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 AC004466.1-201ENST00000599515 1080 ntBASIC12.76□□□□□ -0.37
CAV3P56539 BAP1-211ENST00000615113 489 ntBASIC12.76□□□□□ -0.37
CAV3P56539 BX539320.1-201ENST00000623759 877 ntBASIC12.76□□□□□ -0.37
CAV3P56539 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.76□□□□□ -0.37
CAV3P56539 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.76□□□□□ -0.37
CAV3P56539 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CAV3P56539 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CAV3P56539 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CAV3P56539 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 POM121L14P-201ENST00000406100 1558 ntBASIC12.76□□□□□ -0.37
CAV3P56539 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 DLX4-206ENST00000611342 1662 ntBASIC12.76□□□□□ -0.37
CAV3P56539 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
CAV3P56539 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.76□□□□□ -0.37
CAV3P56539 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.76□□□□□ -0.37
CAV3P56539 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CAV3P56539 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.76□□□□□ -0.37
CAV3P56539 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CAV3P56539 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CAV3P56539 FP325330.2-201ENST00000624219 5630 ntBASIC12.75□□□□□ -0.37
CAV3P56539 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CAV3P56539 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CAV3P56539 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CAV3P56539 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
CAV3P56539 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CAV3P56539 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CAV3P56539 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CAV3P56539 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.75□□□□□ -0.37
CAV3P56539 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CAV3P56539 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CAV3P56539 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CAV3P56539 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.75□□□□□ -0.37
CAV3P56539 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.75□□□□□ -0.37
CAV3P56539 ACKR1-201ENST00000368121 1240 ntBASIC12.75□□□□□ -0.37
CAV3P56539 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CAV3P56539 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.75□□□□□ -0.37
CAV3P56539 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.75□□□□□ -0.37
CAV3P56539 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CAV3P56539 AL035633.1-201ENST00000406139 838 ntBASIC12.75□□□□□ -0.37
CAV3P56539 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.75□□□□□ -0.37
CAV3P56539 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CAV3P56539 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CAV3P56539 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CAV3P56539 RN7SL752P-201ENST00000463779 287 ntBASIC12.75□□□□□ -0.37
CAV3P56539 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.75□□□□□ -0.37
CAV3P56539 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.75□□□□□ -0.37
CAV3P56539 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CAV3P56539 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CAV3P56539 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.75□□□□□ -0.37
CAV3P56539 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.75□□□□□ -0.37
CAV3P56539 AL596325.1-201ENST00000563991 1082 ntBASIC12.75□□□□□ -0.37
CAV3P56539 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.75□□□□□ -0.37
CAV3P56539 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.75□□□□□ -0.37
CAV3P56539 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.75□□□□□ -0.37
CAV3P56539 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.75□□□□□ -0.37
CAV3P56539 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CAV3P56539 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.75□□□□□ -0.37
CAV3P56539 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.75□□□□□ -0.37
CAV3P56539 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms