Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCKAP1LP55160 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCKAP1LP55160 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCKAP1LP55160 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.47■□□□□ 0.07
NCKAP1LP55160 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCKAP1LP55160 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCKAP1LP55160 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCKAP1LP55160 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.47■□□□□ 0.07
NCKAP1LP55160 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.47■□□□□ 0.07
NCKAP1LP55160 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.47■□□□□ 0.07
NCKAP1LP55160 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.47■□□□□ 0.07
NCKAP1LP55160 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.47■□□□□ 0.07
NCKAP1LP55160 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.47■□□□□ 0.07
NCKAP1LP55160 AC095040.1-201ENST00000513286 675 ntBASIC15.47■□□□□ 0.07
NCKAP1LP55160 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.47■□□□□ 0.07
NCKAP1LP55160 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NCKAP1LP55160 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.47■□□□□ 0.07
NCKAP1LP55160 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.47■□□□□ 0.07
NCKAP1LP55160 AC106872.11-201ENST00000605838 421 ntBASIC15.47■□□□□ 0.07
NCKAP1LP55160 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
NCKAP1LP55160 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC15.47■□□□□ 0.07
NCKAP1LP55160 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.47■□□□□ 0.07
NCKAP1LP55160 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NCKAP1LP55160 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCKAP1LP55160 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCKAP1LP55160 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
NCKAP1LP55160 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
NCKAP1LP55160 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.47■□□□□ 0.07
NCKAP1LP55160 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
NCKAP1LP55160 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NCKAP1LP55160 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCKAP1LP55160 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC15.47■□□□□ 0.07
NCKAP1LP55160 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC15.47■□□□□ 0.07
NCKAP1LP55160 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCKAP1LP55160 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.47■□□□□ 0.07
NCKAP1LP55160 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
NCKAP1LP55160 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCKAP1LP55160 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCKAP1LP55160 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC15.47■□□□□ 0.07
NCKAP1LP55160 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCKAP1LP55160 FMO6P-201ENST00000236166 1620 ntBASIC15.46■□□□□ 0.07
NCKAP1LP55160 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
NCKAP1LP55160 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCKAP1LP55160 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
NCKAP1LP55160 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NCKAP1LP55160 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC15.46■□□□□ 0.07
NCKAP1LP55160 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
NCKAP1LP55160 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.07
NCKAP1LP55160 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
NCKAP1LP55160 CETP-203ENST00000566128 1733 ntTSL 5 BASIC15.46■□□□□ 0.07
NCKAP1LP55160 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NCKAP1LP55160 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCKAP1LP55160 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCKAP1LP55160 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCKAP1LP55160 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.46■□□□□ 0.07
NCKAP1LP55160 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NCKAP1LP55160 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCKAP1LP55160 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
NCKAP1LP55160 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCKAP1LP55160 AL627231.1-201ENST00000394467 1125 ntBASIC15.46■□□□□ 0.07
NCKAP1LP55160 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NCKAP1LP55160 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.46■□□□□ 0.07
NCKAP1LP55160 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC15.46■□□□□ 0.07
NCKAP1LP55160 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NCKAP1LP55160 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.46■□□□□ 0.07
NCKAP1LP55160 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCKAP1LP55160 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15.46■□□□□ 0.07
NCKAP1LP55160 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC15.46■□□□□ 0.07
NCKAP1LP55160 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NCKAP1LP55160 AC093462.1-201ENST00000621167 1683 ntBASIC15.46■□□□□ 0.07
NCKAP1LP55160 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCKAP1LP55160 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.46■□□□□ 0.07
NCKAP1LP55160 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
NCKAP1LP55160 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.46■□□□□ 0.07
NCKAP1LP55160 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCKAP1LP55160 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NCKAP1LP55160 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
NCKAP1LP55160 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC15.46■□□□□ 0.07
NCKAP1LP55160 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCKAP1LP55160 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCKAP1LP55160 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC15.46■□□□□ 0.06
NCKAP1LP55160 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
NCKAP1LP55160 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.06
NCKAP1LP55160 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NCKAP1LP55160 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NCKAP1LP55160 API5-208ENST00000531273 1868 ntTSL 2 BASIC15.46■□□□□ 0.06
NCKAP1LP55160 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
NCKAP1LP55160 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.46■□□□□ 0.06
NCKAP1LP55160 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NCKAP1LP55160 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
NCKAP1LP55160 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.45■□□□□ 0.06
NCKAP1LP55160 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCKAP1LP55160 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
NCKAP1LP55160 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.45■□□□□ 0.06
NCKAP1LP55160 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCKAP1LP55160 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCKAP1LP55160 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
NCKAP1LP55160 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
NCKAP1LP55160 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCKAP1LP55160 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms