Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC10.43□□□□□ -0.74
APOC4P55056 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC10.43□□□□□ -0.74
APOC4P55056 AC113935.1-201ENST00000471722 555 ntBASIC10.43□□□□□ -0.74
APOC4P55056 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 MAX-218ENST00000557746 571 ntTSL 4 BASIC10.43□□□□□ -0.74
APOC4P55056 CMC2-204ENST00000562713 573 ntTSL 3 BASIC10.43□□□□□ -0.74
APOC4P55056 CMC2-209ENST00000565108 399 ntTSL 2 BASIC10.43□□□□□ -0.74
APOC4P55056 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC10.43□□□□□ -0.74
APOC4P55056 RN7SL665P-201ENST00000578793 300 ntBASIC10.43□□□□□ -0.74
APOC4P55056 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC10.43□□□□□ -0.74
APOC4P55056 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC10.43□□□□□ -0.74
APOC4P55056 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC10.43□□□□□ -0.74
APOC4P55056 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC10.43□□□□□ -0.74
APOC4P55056 RETN-203ENST00000629642 400 ntTSL 5 BASIC10.43□□□□□ -0.74
APOC4P55056 GSN-209ENST00000449733 2702 ntTSL 2 BASIC10.43□□□□□ -0.74
APOC4P55056 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
APOC4P55056 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
APOC4P55056 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
APOC4P55056 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
APOC4P55056 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC10.43□□□□□ -0.74
APOC4P55056 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC10.43□□□□□ -0.74
APOC4P55056 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC10.43□□□□□ -0.74
APOC4P55056 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC10.43□□□□□ -0.74
APOC4P55056 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
APOC4P55056 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
APOC4P55056 RPL13AP3-202ENST00000494676 1473 ntBASIC10.42□□□□□ -0.74
APOC4P55056 AC007952.5-201ENST00000572818 1486 ntBASIC10.42□□□□□ -0.74
APOC4P55056 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
APOC4P55056 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
APOC4P55056 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
APOC4P55056 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
APOC4P55056 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
APOC4P55056 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC10.42□□□□□ -0.74
APOC4P55056 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC10.42□□□□□ -0.74
APOC4P55056 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
APOC4P55056 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
APOC4P55056 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
APOC4P55056 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
APOC4P55056 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
APOC4P55056 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
APOC4P55056 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
APOC4P55056 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC10.42□□□□□ -0.74
APOC4P55056 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
APOC4P55056 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
APOC4P55056 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC10.42□□□□□ -0.74
APOC4P55056 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
APOC4P55056 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC10.42□□□□□ -0.74
APOC4P55056 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
APOC4P55056 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
APOC4P55056 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
APOC4P55056 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
APOC4P55056 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC10.42□□□□□ -0.74
APOC4P55056 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
APOC4P55056 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
APOC4P55056 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
APOC4P55056 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC10.42□□□□□ -0.74
APOC4P55056 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
APOC4P55056 MIR645-201ENST00000385283 94 ntBASIC10.42□□□□□ -0.74
APOC4P55056 AL512430.1-201ENST00000392575 860 ntBASIC10.42□□□□□ -0.74
APOC4P55056 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC10.42□□□□□ -0.74
APOC4P55056 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC10.42□□□□□ -0.74
APOC4P55056 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
APOC4P55056 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC10.42□□□□□ -0.74
APOC4P55056 RPL7P35-201ENST00000446943 740 ntBASIC10.42□□□□□ -0.74
APOC4P55056 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC10.42□□□□□ -0.74
APOC4P55056 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC10.42□□□□□ -0.74
APOC4P55056 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC10.42□□□□□ -0.74
APOC4P55056 KRT18P15-201ENST00000458108 1291 ntBASIC10.42□□□□□ -0.74
APOC4P55056 AC130709.1-201ENST00000484779 1212 ntBASIC10.42□□□□□ -0.74
APOC4P55056 RPL18AP8-201ENST00000486071 528 ntBASIC10.42□□□□□ -0.74
APOC4P55056 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC10.42□□□□□ -0.74
APOC4P55056 PARP8-218ENST00000513738 596 ntTSL 4 BASIC10.42□□□□□ -0.74
APOC4P55056 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
APOC4P55056 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
APOC4P55056 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC10.42□□□□□ -0.74
APOC4P55056 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC10.42□□□□□ -0.74
APOC4P55056 NUDT4P2-201ENST00000578341 546 ntBASIC10.42□□□□□ -0.74
APOC4P55056 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
APOC4P55056 AP000322.3-201ENST00000608665 388 ntBASIC10.42□□□□□ -0.74
APOC4P55056 AL805961.1-201ENST00000642026 753 ntBASIC10.42□□□□□ -0.74
APOC4P55056 TNRC18P2-201ENST00000417666 2714 ntBASIC10.42□□□□□ -0.74
APOC4P55056 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
APOC4P55056 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
APOC4P55056 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC10.42□□□□□ -0.74
APOC4P55056 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC10.42□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms