Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC13.81□□□□□ -0.2
PDX1P52945 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC13.81□□□□□ -0.2
PDX1P52945 CR383656.3-201ENST00000551315 183 ntBASIC13.81□□□□□ -0.2
PDX1P52945 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.81□□□□□ -0.2
PDX1P52945 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.81□□□□□ -0.2
PDX1P52945 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PDX1P52945 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDX1P52945 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDX1P52945 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
PDX1P52945 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.81□□□□□ -0.2
PDX1P52945 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.81□□□□□ -0.2
PDX1P52945 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
PDX1P52945 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PDX1P52945 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
PDX1P52945 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.81□□□□□ -0.2
PDX1P52945 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.81□□□□□ -0.2
PDX1P52945 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PDX1P52945 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDX1P52945 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDX1P52945 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDX1P52945 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
PDX1P52945 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PDX1P52945 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDX1P52945 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PDX1P52945 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDX1P52945 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.81□□□□□ -0.2
PDX1P52945 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDX1P52945 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDX1P52945 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDX1P52945 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDX1P52945 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
PDX1P52945 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDX1P52945 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PDX1P52945 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDX1P52945 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDX1P52945 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDX1P52945 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PDX1P52945 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDX1P52945 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDX1P52945 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDX1P52945 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PDX1P52945 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
PDX1P52945 MIR645-201ENST00000385283 94 ntBASIC13.8□□□□□ -0.2
PDX1P52945 GUSBP10-201ENST00000417412 665 ntBASIC13.8□□□□□ -0.2
PDX1P52945 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC13.8□□□□□ -0.2
PDX1P52945 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
PDX1P52945 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDX1P52945 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC13.8□□□□□ -0.2
PDX1P52945 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
PDX1P52945 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.8□□□□□ -0.2
PDX1P52945 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC13.8□□□□□ -0.2
PDX1P52945 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PDX1P52945 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC13.8□□□□□ -0.2
PDX1P52945 RN7SL470P-201ENST00000583069 259 ntBASIC13.8□□□□□ -0.2
PDX1P52945 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
PDX1P52945 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC13.8□□□□□ -0.2
PDX1P52945 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDX1P52945 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDX1P52945 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.8□□□□□ -0.2
PDX1P52945 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PDX1P52945 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDX1P52945 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
PDX1P52945 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.8□□□□□ -0.2
PDX1P52945 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.8□□□□□ -0.2
PDX1P52945 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.8□□□□□ -0.2
PDX1P52945 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC13.8□□□□□ -0.2
PDX1P52945 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PDX1P52945 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDX1P52945 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDX1P52945 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PDX1P52945 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.8□□□□□ -0.2
PDX1P52945 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
PDX1P52945 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
PDX1P52945 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDX1P52945 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.8□□□□□ -0.2
PDX1P52945 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.79□□□□□ -0.2
PDX1P52945 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDX1P52945 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PDX1P52945 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PDX1P52945 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PDX1P52945 AC015688.4-201ENST00000580780 1647 ntBASIC13.79□□□□□ -0.2
PDX1P52945 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.79□□□□□ -0.2
PDX1P52945 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
PDX1P52945 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.79□□□□□ -0.2
PDX1P52945 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDX1P52945 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDX1P52945 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PDX1P52945 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDX1P52945 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDX1P52945 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.79□□□□□ -0.2
PDX1P52945 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.79□□□□□ -0.2
PDX1P52945 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
PDX1P52945 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
PDX1P52945 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.79□□□□□ -0.2
PDX1P52945 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PDX1P52945 AC073869.2-201ENST00000417338 1026 ntBASIC13.79□□□□□ -0.2
PDX1P52945 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PDX1P52945 OR8T1P-201ENST00000421347 918 ntBASIC13.79□□□□□ -0.2
PDX1P52945 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC13.79□□□□□ -0.2
PDX1P52945 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms