Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLCSP50747 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HLCSP50747 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
HLCSP50747 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.67□□□□□ -0.22
HLCSP50747 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
HLCSP50747 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.67□□□□□ -0.22
HLCSP50747 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLCSP50747 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLCSP50747 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLCSP50747 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLCSP50747 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.67□□□□□ -0.22
HLCSP50747 AC010141.1-201ENST00000411585 623 ntBASIC13.67□□□□□ -0.22
HLCSP50747 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLCSP50747 BCYRN1-201ENST00000418539 200 ntBASIC13.67□□□□□ -0.22
HLCSP50747 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.67□□□□□ -0.22
HLCSP50747 SERPINA13P-202ENST00000478994 924 ntBASIC13.67□□□□□ -0.22
HLCSP50747 ALG3P1-201ENST00000508806 1114 ntBASIC13.67□□□□□ -0.22
HLCSP50747 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.67□□□□□ -0.22
HLCSP50747 DUX4L46-201ENST00000566845 751 ntBASIC13.67□□□□□ -0.22
HLCSP50747 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.67□□□□□ -0.22
HLCSP50747 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
HLCSP50747 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.67□□□□□ -0.22
HLCSP50747 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.67□□□□□ -0.22
HLCSP50747 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.67□□□□□ -0.22
HLCSP50747 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLCSP50747 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.67□□□□□ -0.22
HLCSP50747 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLCSP50747 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
HLCSP50747 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
HLCSP50747 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLCSP50747 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLCSP50747 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLCSP50747 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.67□□□□□ -0.22
HLCSP50747 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLCSP50747 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
HLCSP50747 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.67□□□□□ -0.22
HLCSP50747 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLCSP50747 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLCSP50747 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLCSP50747 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.67□□□□□ -0.22
HLCSP50747 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.67□□□□□ -0.22
HLCSP50747 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLCSP50747 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLCSP50747 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.67□□□□□ -0.22
HLCSP50747 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLCSP50747 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLCSP50747 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLCSP50747 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLCSP50747 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.66□□□□□ -0.22
HLCSP50747 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLCSP50747 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLCSP50747 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HLCSP50747 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
HLCSP50747 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.66□□□□□ -0.22
HLCSP50747 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HLCSP50747 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
HLCSP50747 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLCSP50747 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLCSP50747 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLCSP50747 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HLCSP50747 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLCSP50747 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.66□□□□□ -0.22
HLCSP50747 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HLCSP50747 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HLCSP50747 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
HLCSP50747 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLCSP50747 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HLCSP50747 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLCSP50747 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HLCSP50747 CALR4P-201ENST00000431943 946 ntBASIC13.66□□□□□ -0.22
HLCSP50747 FAM58BP-201ENST00000439056 645 ntBASIC13.66□□□□□ -0.22
HLCSP50747 TUBB8P8-201ENST00000458717 1058 ntBASIC13.66□□□□□ -0.22
HLCSP50747 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.66□□□□□ -0.22
HLCSP50747 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLCSP50747 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HLCSP50747 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HLCSP50747 AC100827.2-201ENST00000563214 1194 ntBASIC13.66□□□□□ -0.22
HLCSP50747 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.66□□□□□ -0.22
HLCSP50747 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
HLCSP50747 BX088702.1-201ENST00000610784 235 ntBASIC13.66□□□□□ -0.22
HLCSP50747 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HLCSP50747 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.66□□□□□ -0.22
HLCSP50747 AL162426.1-201ENST00000624141 743 ntBASIC13.66□□□□□ -0.22
HLCSP50747 AL139099.5-201ENST00000635274 300 ntBASIC13.66□□□□□ -0.22
HLCSP50747 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HLCSP50747 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.66□□□□□ -0.22
HLCSP50747 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLCSP50747 AC215219.1-201ENST00000400706 1817 ntBASIC13.66□□□□□ -0.22
HLCSP50747 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
HLCSP50747 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLCSP50747 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
HLCSP50747 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
HLCSP50747 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.66□□□□□ -0.22
HLCSP50747 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.66□□□□□ -0.22
HLCSP50747 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLCSP50747 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLCSP50747 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLCSP50747 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLCSP50747 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
HLCSP50747 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms