Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CX3CR1P49238 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
CX3CR1P49238 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.56□□□□□ -0.4
CX3CR1P49238 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.56□□□□□ -0.4
CX3CR1P49238 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.56□□□□□ -0.4
CX3CR1P49238 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.56□□□□□ -0.4
CX3CR1P49238 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.55□□□□□ -0.4
CX3CR1P49238 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.55□□□□□ -0.4
CX3CR1P49238 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CX3CR1P49238 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.55□□□□□ -0.4
CX3CR1P49238 AL928654.5-201ENST00000624831 2501 ntBASIC12.55□□□□□ -0.4
CX3CR1P49238 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CX3CR1P49238 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CX3CR1P49238 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.55□□□□□ -0.4
CX3CR1P49238 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CX3CR1P49238 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CX3CR1P49238 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.55□□□□□ -0.4
CX3CR1P49238 FAM58BP-201ENST00000439056 645 ntBASIC12.55□□□□□ -0.4
CX3CR1P49238 AC012441.2-201ENST00000444843 739 ntBASIC12.55□□□□□ -0.4
CX3CR1P49238 KLF2P1-201ENST00000447438 1042 ntBASIC12.55□□□□□ -0.4
CX3CR1P49238 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.55□□□□□ -0.4
CX3CR1P49238 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.55□□□□□ -0.4
CX3CR1P49238 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CX3CR1P49238 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC12.55□□□□□ -0.4
CX3CR1P49238 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.55□□□□□ -0.4
CX3CR1P49238 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.55□□□□□ -0.4
CX3CR1P49238 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.55□□□□□ -0.4
CX3CR1P49238 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC12.55□□□□□ -0.4
CX3CR1P49238 MIR4783-201ENST00000580343 82 ntBASIC12.55□□□□□ -0.4
CX3CR1P49238 AC005962.1-201ENST00000584100 773 ntBASIC12.55□□□□□ -0.4
CX3CR1P49238 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.55□□□□□ -0.4
CX3CR1P49238 LINC02084-201ENST00000606069 1096 ntBASIC12.55□□□□□ -0.4
CX3CR1P49238 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CX3CR1P49238 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CX3CR1P49238 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.55□□□□□ -0.4
CX3CR1P49238 Z98259.2-201ENST00000641583 609 ntBASIC12.55□□□□□ -0.4
CX3CR1P49238 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.55□□□□□ -0.4
CX3CR1P49238 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CX3CR1P49238 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.55□□□□□ -0.4
CX3CR1P49238 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CX3CR1P49238 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.55□□□□□ -0.4
CX3CR1P49238 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CX3CR1P49238 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.55□□□□□ -0.4
CX3CR1P49238 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CX3CR1P49238 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CX3CR1P49238 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.54□□□□□ -0.4
CX3CR1P49238 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CX3CR1P49238 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CX3CR1P49238 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CX3CR1P49238 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CX3CR1P49238 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CX3CR1P49238 CR383656.2-201ENST00000548656 2254 ntBASIC12.54□□□□□ -0.4
CX3CR1P49238 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CX3CR1P49238 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CX3CR1P49238 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CX3CR1P49238 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CX3CR1P49238 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CX3CR1P49238 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms