Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
LTBRP36941 SNORD88B-201ENST00000408454 91 ntBASIC14.27□□□□□ -0.13
LTBRP36941 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC14.27□□□□□ -0.13
LTBRP36941 AC026884.1-201ENST00000418296 457 ntBASIC14.27□□□□□ -0.13
LTBRP36941 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC14.27□□□□□ -0.13
LTBRP36941 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LTBRP36941 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LTBRP36941 CETN3-205ENST00000522842 664 ntTSL 2 BASIC14.27□□□□□ -0.13
LTBRP36941 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LTBRP36941 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC14.27□□□□□ -0.13
LTBRP36941 RN7SL134P-201ENST00000579756 303 ntBASIC14.27□□□□□ -0.13
LTBRP36941 HCG18-241ENST00000602290 821 ntTSL 2 BASIC14.27□□□□□ -0.13
LTBRP36941 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
LTBRP36941 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
LTBRP36941 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LTBRP36941 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
LTBRP36941 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LTBRP36941 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.27□□□□□ -0.13
LTBRP36941 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
LTBRP36941 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LTBRP36941 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LTBRP36941 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LTBRP36941 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LTBRP36941 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LTBRP36941 SFPQP1-201ENST00000446621 1786 ntBASIC14.27□□□□□ -0.13
LTBRP36941 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LTBRP36941 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LTBRP36941 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LTBRP36941 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
LTBRP36941 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBRP36941 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBRP36941 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC14.26□□□□□ -0.13
LTBRP36941 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.26□□□□□ -0.13
LTBRP36941 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBRP36941 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
LTBRP36941 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LTBRP36941 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBRP36941 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBRP36941 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LTBRP36941 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.26□□□□□ -0.13
LTBRP36941 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC14.26□□□□□ -0.13
LTBRP36941 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBRP36941 AC026271.1-201ENST00000447794 1348 ntBASIC14.26□□□□□ -0.13
LTBRP36941 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBRP36941 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LTBRP36941 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LTBRP36941 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LTBRP36941 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBRP36941 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
LTBRP36941 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC14.26□□□□□ -0.13
LTBRP36941 CA5BP1-205ENST00000435806 1064 ntBASIC14.26□□□□□ -0.13
LTBRP36941 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC14.26□□□□□ -0.13
LTBRP36941 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC14.26□□□□□ -0.13
LTBRP36941 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC14.26□□□□□ -0.13
LTBRP36941 MTHFD2P7-201ENST00000483867 983 ntBASIC14.26□□□□□ -0.13
LTBRP36941 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC14.26□□□□□ -0.13
LTBRP36941 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC14.26□□□□□ -0.13
LTBRP36941 AC120498.5-201ENST00000561757 299 ntBASIC14.26□□□□□ -0.13
LTBRP36941 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC14.26□□□□□ -0.13
LTBRP36941 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC14.26□□□□□ -0.13
LTBRP36941 AC136475.7-201ENST00000602949 592 ntBASIC14.26□□□□□ -0.13
LTBRP36941 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LTBRP36941 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC14.26□□□□□ -0.13
LTBRP36941 AC139100.2-201ENST00000616901 662 ntBASIC14.26□□□□□ -0.13
LTBRP36941 AC134878.2-201ENST00000620700 1265 ntBASIC14.26□□□□□ -0.13
LTBRP36941 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC14.26□□□□□ -0.13
LTBRP36941 AL139424.3-202ENST00000641619 917 ntBASIC14.26□□□□□ -0.13
LTBRP36941 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBRP36941 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBRP36941 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBRP36941 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC14.26□□□□□ -0.13
LTBRP36941 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBRP36941 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.26□□□□□ -0.13
LTBRP36941 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBRP36941 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LTBRP36941 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.26□□□□□ -0.13
LTBRP36941 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC14.26□□□□□ -0.13
LTBRP36941 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LTBRP36941 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LTBRP36941 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LTBRP36941 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LTBRP36941 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LTBRP36941 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBRP36941 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
LTBRP36941 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
LTBRP36941 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LTBRP36941 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LTBRP36941 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LTBRP36941 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LTBRP36941 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.25□□□□□ -0.13
LTBRP36941 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.25□□□□□ -0.13
LTBRP36941 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LTBRP36941 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LTBRP36941 AC089987.1-201ENST00000551654 2209 ntBASIC14.25□□□□□ -0.13
LTBRP36941 AC073347.1-201ENST00000421633 2643 ntBASIC14.25□□□□□ -0.13
LTBRP36941 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LTBRP36941 AL591499.1-201ENST00000307155 1153 ntBASIC14.25□□□□□ -0.13
LTBRP36941 OR7E12P-201ENST00000344740 973 ntBASIC14.25□□□□□ -0.13
LTBRP36941 RBP4-203ENST00000371469 814 ntTSL 5 BASIC14.25□□□□□ -0.13
LTBRP36941 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms