Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.94□□□□□ -0.18
TRIM23P36406 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC13.94□□□□□ -0.18
TRIM23P36406 NAT9-224ENST00000583757 583 ntTSL 3 BASIC13.94□□□□□ -0.18
TRIM23P36406 BAP1-211ENST00000615113 489 ntBASIC13.94□□□□□ -0.18
TRIM23P36406 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM23P36406 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM23P36406 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
TRIM23P36406 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM23P36406 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC13.94□□□□□ -0.18
TRIM23P36406 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM23P36406 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM23P36406 AC097376.2-205ENST00000610159 5334 ntBASIC13.94□□□□□ -0.18
TRIM23P36406 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM23P36406 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM23P36406 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM23P36406 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
TRIM23P36406 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM23P36406 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM23P36406 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.94□□□□□ -0.18
TRIM23P36406 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM23P36406 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC13.93□□□□□ -0.18
TRIM23P36406 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.93□□□□□ -0.18
TRIM23P36406 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 AC090643.2-201ENST00000623442 2029 ntBASIC13.93□□□□□ -0.18
TRIM23P36406 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
TRIM23P36406 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.93□□□□□ -0.18
TRIM23P36406 AL139158.3-201ENST00000641212 1562 ntBASIC13.93□□□□□ -0.18
TRIM23P36406 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.93□□□□□ -0.18
TRIM23P36406 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC13.93□□□□□ -0.18
TRIM23P36406 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC13.93□□□□□ -0.18
TRIM23P36406 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC13.93□□□□□ -0.18
TRIM23P36406 AL354861.1-201ENST00000445213 355 ntBASIC13.93□□□□□ -0.18
TRIM23P36406 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC13.93□□□□□ -0.18
TRIM23P36406 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
TRIM23P36406 AC104784.1-201ENST00000473096 294 ntBASIC13.93□□□□□ -0.18
TRIM23P36406 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC13.93□□□□□ -0.18
TRIM23P36406 TMCO5B-205ENST00000530020 894 ntBASIC13.93□□□□□ -0.18
TRIM23P36406 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC13.93□□□□□ -0.18
TRIM23P36406 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13.93□□□□□ -0.18
TRIM23P36406 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC13.93□□□□□ -0.18
TRIM23P36406 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC13.93□□□□□ -0.18
TRIM23P36406 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
TRIM23P36406 TP53-221ENST00000615910 1149 ntTSL 5 BASIC13.93□□□□□ -0.18
TRIM23P36406 AC005618.3-201ENST00000624928 458 ntBASIC13.93□□□□□ -0.18
TRIM23P36406 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.93□□□□□ -0.18
TRIM23P36406 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.93□□□□□ -0.18
TRIM23P36406 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRIM23P36406 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TRIM23P36406 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRIM23P36406 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.93□□□□□ -0.18
TRIM23P36406 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRIM23P36406 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.93□□□□□ -0.18
TRIM23P36406 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
TRIM23P36406 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
TRIM23P36406 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.93□□□□□ -0.18
TRIM23P36406 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.93□□□□□ -0.18
TRIM23P36406 AC004554.1-201ENST00000422830 1468 ntBASIC13.93□□□□□ -0.18
TRIM23P36406 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
TRIM23P36406 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM23P36406 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRIM23P36406 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.92□□□□□ -0.18
TRIM23P36406 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM23P36406 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM23P36406 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM23P36406 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.92□□□□□ -0.18
TRIM23P36406 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.92□□□□□ -0.18
TRIM23P36406 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
TRIM23P36406 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRIM23P36406 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms