Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPS1P31327 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPS1P31327 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC19.37■□□□□ 0.69
CPS1P31327 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPS1P31327 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC19.37■□□□□ 0.69
CPS1P31327 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPS1P31327 AC000078.1-201ENST00000420617 682 ntBASIC19.37■□□□□ 0.69
CPS1P31327 AC041040.1-201ENST00000425197 460 ntBASIC19.37■□□□□ 0.69
CPS1P31327 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC19.37■□□□□ 0.69
CPS1P31327 FTLP3-201ENST00000427242 528 ntBASIC19.37■□□□□ 0.69
CPS1P31327 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC19.37■□□□□ 0.69
CPS1P31327 RPL3P9-201ENST00000463217 1183 ntBASIC19.37■□□□□ 0.69
CPS1P31327 OR2A1-AS1-203ENST00000468575 568 ntBASIC19.37■□□□□ 0.69
CPS1P31327 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC19.37■□□□□ 0.69
CPS1P31327 NDUFB2P1-201ENST00000506966 295 ntBASIC19.37■□□□□ 0.69
CPS1P31327 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
CPS1P31327 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC19.37■□□□□ 0.69
CPS1P31327 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC19.37■□□□□ 0.69
CPS1P31327 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CPS1P31327 AC009812.1-201ENST00000605948 1059 ntBASIC19.37■□□□□ 0.69
CPS1P31327 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPS1P31327 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CPS1P31327 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC19.37■□□□□ 0.69
CPS1P31327 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPS1P31327 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPS1P31327 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC19.37■□□□□ 0.69
CPS1P31327 AC020910.6-201ENST00000623084 1459 ntBASIC19.37■□□□□ 0.69
CPS1P31327 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPS1P31327 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CPS1P31327 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPS1P31327 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.37■□□□□ 0.69
CPS1P31327 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPS1P31327 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CPS1P31327 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPS1P31327 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPS1P31327 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPS1P31327 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CPS1P31327 AL031577.1-201ENST00000339867 399 ntBASIC19.36■□□□□ 0.69
CPS1P31327 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPS1P31327 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPS1P31327 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CPS1P31327 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC19.36■□□□□ 0.69
CPS1P31327 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC19.36■□□□□ 0.69
CPS1P31327 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC19.36■□□□□ 0.69
CPS1P31327 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC19.36■□□□□ 0.69
CPS1P31327 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC19.36■□□□□ 0.69
CPS1P31327 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC19.36■□□□□ 0.69
CPS1P31327 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CPS1P31327 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPS1P31327 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPS1P31327 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC19.36■□□□□ 0.69
CPS1P31327 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPS1P31327 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC19.36■□□□□ 0.69
CPS1P31327 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPS1P31327 RCC2P1-201ENST00000452257 1476 ntBASIC19.36■□□□□ 0.69
CPS1P31327 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
CPS1P31327 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPS1P31327 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPS1P31327 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.36■□□□□ 0.69
CPS1P31327 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CPS1P31327 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPS1P31327 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPS1P31327 RPS6-201ENST00000315377 863 ntTSL 3 BASIC19.35■□□□□ 0.69
CPS1P31327 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC19.35■□□□□ 0.69
CPS1P31327 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPS1P31327 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC19.35■□□□□ 0.69
CPS1P31327 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC19.35■□□□□ 0.69
CPS1P31327 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC19.35■□□□□ 0.69
CPS1P31327 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPS1P31327 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC19.35■□□□□ 0.69
CPS1P31327 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC19.35■□□□□ 0.69
CPS1P31327 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC19.35■□□□□ 0.69
CPS1P31327 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CPS1P31327 PAX6-247ENST00000638965 979 ntTSL 5 BASIC19.35■□□□□ 0.69
CPS1P31327 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
CPS1P31327 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPS1P31327 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPS1P31327 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPS1P31327 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC19.35■□□□□ 0.69
CPS1P31327 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPS1P31327 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC19.35■□□□□ 0.69
CPS1P31327 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPS1P31327 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPS1P31327 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC19.35■□□□□ 0.69
CPS1P31327 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPS1P31327 AC093462.1-201ENST00000621167 1683 ntBASIC19.35■□□□□ 0.69
CPS1P31327 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPS1P31327 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPS1P31327 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC19.35■□□□□ 0.69
CPS1P31327 DNM1P48-201ENST00000419538 439 ntBASIC19.35■□□□□ 0.69
CPS1P31327 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
CPS1P31327 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC19.35■□□□□ 0.69
CPS1P31327 Z84721.1-201ENST00000438841 372 ntBASIC19.35■□□□□ 0.69
CPS1P31327 AC131235.2-201ENST00000445553 1057 ntBASIC19.35■□□□□ 0.69
CPS1P31327 AC104212.2-201ENST00000478813 628 ntBASIC19.35■□□□□ 0.69
CPS1P31327 KRT18P42-201ENST00000505048 1255 ntBASIC19.35■□□□□ 0.69
CPS1P31327 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC19.35■□□□□ 0.69
CPS1P31327 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC19.35■□□□□ 0.69
CPS1P31327 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPS1P31327 AC022382.1-201ENST00000602768 336 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms