Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HTR1EP28566 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HTR1EP28566 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HTR1EP28566 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HTR1EP28566 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HTR1EP28566 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HTR1EP28566 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
HTR1EP28566 MIR1202-201ENST00000408529 83 ntBASIC13.69□□□□□ -0.22
HTR1EP28566 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.69□□□□□ -0.22
HTR1EP28566 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HTR1EP28566 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HTR1EP28566 MPRIPP1-201ENST00000452433 1089 ntBASIC13.69□□□□□ -0.22
HTR1EP28566 BX284668.4-201ENST00000453917 508 ntBASIC13.69□□□□□ -0.22
HTR1EP28566 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.69□□□□□ -0.22
HTR1EP28566 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HTR1EP28566 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.69□□□□□ -0.22
HTR1EP28566 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HTR1EP28566 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.69□□□□□ -0.22
HTR1EP28566 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.69□□□□□ -0.22
HTR1EP28566 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.69□□□□□ -0.22
HTR1EP28566 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC13.69□□□□□ -0.22
HTR1EP28566 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.69□□□□□ -0.22
HTR1EP28566 SNX1-214ENST00000625244 324 ntTSL 5 BASIC13.69□□□□□ -0.22
HTR1EP28566 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
HTR1EP28566 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HTR1EP28566 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HTR1EP28566 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HTR1EP28566 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HTR1EP28566 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HTR1EP28566 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
HTR1EP28566 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
HTR1EP28566 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
HTR1EP28566 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.69□□□□□ -0.22
HTR1EP28566 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HTR1EP28566 AL031595.1-201ENST00000623969 4709 ntBASIC13.69□□□□□ -0.22
HTR1EP28566 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HTR1EP28566 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HTR1EP28566 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HTR1EP28566 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
HTR1EP28566 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.68□□□□□ -0.22
HTR1EP28566 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1EP28566 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.68□□□□□ -0.22
HTR1EP28566 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.68□□□□□ -0.22
HTR1EP28566 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1EP28566 AC024075.2-201ENST00000598112 1473 ntBASIC13.68□□□□□ -0.22
HTR1EP28566 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1EP28566 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1EP28566 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1EP28566 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1EP28566 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1EP28566 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HTR1EP28566 AC009093.10-201ENST00000641956 1442 ntBASIC13.68□□□□□ -0.22
HTR1EP28566 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.68□□□□□ -0.22
HTR1EP28566 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.68□□□□□ -0.22
HTR1EP28566 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1EP28566 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.68□□□□□ -0.22
HTR1EP28566 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.68□□□□□ -0.22
HTR1EP28566 GGCT-203ENST00000409144 836 ntTSL 2 BASIC13.68□□□□□ -0.22
HTR1EP28566 HINT2P1-201ENST00000419438 481 ntBASIC13.68□□□□□ -0.22
HTR1EP28566 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC13.68□□□□□ -0.22
HTR1EP28566 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.68□□□□□ -0.22
HTR1EP28566 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.68□□□□□ -0.22
HTR1EP28566 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC13.68□□□□□ -0.22
HTR1EP28566 EIF4HP1-201ENST00000453115 687 ntBASIC13.68□□□□□ -0.22
HTR1EP28566 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1EP28566 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.68□□□□□ -0.22
HTR1EP28566 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
HTR1EP28566 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1EP28566 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.68□□□□□ -0.22
HTR1EP28566 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1EP28566 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.68□□□□□ -0.22
HTR1EP28566 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.68□□□□□ -0.22
HTR1EP28566 EEF1DP1-201ENST00000585891 896 ntBASIC13.68□□□□□ -0.22
HTR1EP28566 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
HTR1EP28566 AC145423.3-201ENST00000615987 467 ntBASIC13.68□□□□□ -0.22
HTR1EP28566 AC132938.4-201ENST00000623835 848 ntBASIC13.68□□□□□ -0.22
HTR1EP28566 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.68□□□□□ -0.22
HTR1EP28566 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1EP28566 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1EP28566 DMBT1P1-203ENST00000636837 4628 ntBASIC13.68□□□□□ -0.22
HTR1EP28566 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1EP28566 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1EP28566 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1EP28566 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1EP28566 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.68□□□□□ -0.22
HTR1EP28566 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
HTR1EP28566 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
HTR1EP28566 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.68□□□□□ -0.22
HTR1EP28566 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.68□□□□□ -0.22
HTR1EP28566 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1EP28566 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1EP28566 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1EP28566 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
HTR1EP28566 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1EP28566 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.67□□□□□ -0.22
HTR1EP28566 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.67□□□□□ -0.22
HTR1EP28566 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.67□□□□□ -0.22
HTR1EP28566 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HTR1EP28566 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.67□□□□□ -0.22
HTR1EP28566 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms