Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC073869.1-201ENST00000415574 2762 ntBASIC12.21□□□□□ -0.46
CCL1P22362 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CCL1P22362 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCL1P22362 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCL1P22362 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CCL1P22362 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.21□□□□□ -0.46
CCL1P22362 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCL1P22362 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCL1P22362 AC107918.4-201ENST00000641966 3141 ntBASIC12.21□□□□□ -0.46
CCL1P22362 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.21□□□□□ -0.46
CCL1P22362 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CCL1P22362 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCL1P22362 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCL1P22362 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCL1P22362 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
CCL1P22362 AP002761.4-201ENST00000565433 3361 ntBASIC12.21□□□□□ -0.46
CCL1P22362 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.21□□□□□ -0.46
CCL1P22362 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
CCL1P22362 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 Z98885.3-201ENST00000624882 1757 ntBASIC12.2□□□□□ -0.46
CCL1P22362 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.2□□□□□ -0.46
CCL1P22362 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 AC004899.1-201ENST00000424687 1714 ntBASIC12.2□□□□□ -0.46
CCL1P22362 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CCL1P22362 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
CCL1P22362 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.2□□□□□ -0.46
CCL1P22362 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CCL1P22362 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 AC019294.4-201ENST00000561777 2905 ntBASIC12.2□□□□□ -0.46
CCL1P22362 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.2□□□□□ -0.46
CCL1P22362 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
CCL1P22362 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
CCL1P22362 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.2□□□□□ -0.46
CCL1P22362 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
CCL1P22362 Z93015.1-201ENST00000451718 390 ntBASIC12.2□□□□□ -0.46
CCL1P22362 ACA64.2-201ENST00000459014 129 ntBASIC12.2□□□□□ -0.46
CCL1P22362 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12.2□□□□□ -0.46
CCL1P22362 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.2□□□□□ -0.46
CCL1P22362 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.2□□□□□ -0.46
CCL1P22362 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
CCL1P22362 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.2□□□□□ -0.46
CCL1P22362 MIR3615-201ENST00000581999 87 ntBASIC12.2□□□□□ -0.46
CCL1P22362 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.2□□□□□ -0.46
CCL1P22362 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.2□□□□□ -0.46
CCL1P22362 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.2□□□□□ -0.46
CCL1P22362 AC068587.8-201ENST00000641239 219 ntBASIC12.2□□□□□ -0.46
CCL1P22362 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC12.2□□□□□ -0.46
CCL1P22362 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.2□□□□□ -0.46
CCL1P22362 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 AC010970.1-201ENST00000445125 1848 ntBASIC12.2□□□□□ -0.46
CCL1P22362 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CCL1P22362 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.2□□□□□ -0.46
CCL1P22362 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CCL1P22362 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CCL1P22362 ZNF493-208ENST00000599461 1769 ntBASIC12.2□□□□□ -0.46
CCL1P22362 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
CCL1P22362 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 AC073862.5-201ENST00000624129 2027 ntBASIC12.2□□□□□ -0.46
CCL1P22362 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.2□□□□□ -0.46
CCL1P22362 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.2□□□□□ -0.46
CCL1P22362 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
CCL1P22362 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.2□□□□□ -0.46
CCL1P22362 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL1P22362 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.2□□□□□ -0.46
CCL1P22362 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.19□□□□□ -0.46
CCL1P22362 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL1P22362 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL1P22362 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL1P22362 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL1P22362 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL1P22362 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL1P22362 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL1P22362 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms