Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC3P19447 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ERCC3P19447 LINC01815-202ENST00000641468 1409 ntBASIC16.48■□□□□ 0.23
ERCC3P19447 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ERCC3P19447 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ERCC3P19447 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC3P19447 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.48■□□□□ 0.23
ERCC3P19447 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.48■□□□□ 0.23
ERCC3P19447 RNA5SP417-201ENST00000516459 108 ntBASIC16.48■□□□□ 0.23
ERCC3P19447 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC3P19447 AC140658.4-201ENST00000561990 352 ntBASIC16.48■□□□□ 0.23
ERCC3P19447 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC3P19447 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
ERCC3P19447 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
ERCC3P19447 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC3P19447 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC3P19447 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC3P19447 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC3P19447 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC3P19447 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC3P19447 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC3P19447 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC3P19447 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC3P19447 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC3P19447 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC3P19447 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC3P19447 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC3P19447 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.47■□□□□ 0.23
ERCC3P19447 AC027601.5-201ENST00000624065 2482 ntBASIC16.47■□□□□ 0.23
ERCC3P19447 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ERCC3P19447 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC3P19447 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.47■□□□□ 0.23
ERCC3P19447 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC3P19447 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC3P19447 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.47■□□□□ 0.23
ERCC3P19447 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.47■□□□□ 0.23
ERCC3P19447 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.47■□□□□ 0.23
ERCC3P19447 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.47■□□□□ 0.23
ERCC3P19447 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC3P19447 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC3P19447 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.47■□□□□ 0.23
ERCC3P19447 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC3P19447 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC3P19447 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.47■□□□□ 0.23
ERCC3P19447 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC3P19447 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.47■□□□□ 0.23
ERCC3P19447 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.47■□□□□ 0.23
ERCC3P19447 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.47■□□□□ 0.23
ERCC3P19447 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.47■□□□□ 0.23
ERCC3P19447 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.47■□□□□ 0.23
ERCC3P19447 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.47■□□□□ 0.23
ERCC3P19447 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.47■□□□□ 0.23
ERCC3P19447 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
ERCC3P19447 AP000322.3-201ENST00000608665 388 ntBASIC16.47■□□□□ 0.23
ERCC3P19447 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.47■□□□□ 0.23
ERCC3P19447 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ERCC3P19447 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC3P19447 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC3P19447 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC16.47■□□□□ 0.23
ERCC3P19447 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC3P19447 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC3P19447 LAP3P2-201ENST00000454686 1454 ntBASIC16.47■□□□□ 0.23
ERCC3P19447 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC3P19447 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.47■□□□□ 0.23
ERCC3P19447 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC3P19447 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ERCC3P19447 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC3P19447 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC3P19447 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC3P19447 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC3P19447 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.46■□□□□ 0.23
ERCC3P19447 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.46■□□□□ 0.23
ERCC3P19447 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC3P19447 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC3P19447 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
ERCC3P19447 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
ERCC3P19447 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC3P19447 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC3P19447 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC3P19447 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC3P19447 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.46■□□□□ 0.23
ERCC3P19447 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
ERCC3P19447 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.46■□□□□ 0.23
ERCC3P19447 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.46■□□□□ 0.23
ERCC3P19447 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ERCC3P19447 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC3P19447 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
ERCC3P19447 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC3P19447 ERP29P1-201ENST00000442902 706 ntBASIC16.46■□□□□ 0.23
ERCC3P19447 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC16.46■□□□□ 0.23
ERCC3P19447 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC16.46■□□□□ 0.23
ERCC3P19447 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.46■□□□□ 0.23
ERCC3P19447 DBP-202ENST00000593500 712 ntTSL 2 BASIC16.46■□□□□ 0.23
ERCC3P19447 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.46■□□□□ 0.23
ERCC3P19447 AC009145.4-201ENST00000625119 1294 ntBASIC16.46■□□□□ 0.23
ERCC3P19447 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.46■□□□□ 0.23
ERCC3P19447 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC3P19447 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC3P19447 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC3P19447 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms