Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
ERCC2P18074 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
ERCC2P18074 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
ERCC2P18074 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
ERCC2P18074 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.61□□□□□ -0.07
ERCC2P18074 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
ERCC2P18074 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
ERCC2P18074 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.61□□□□□ -0.07
ERCC2P18074 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.61□□□□□ -0.07
ERCC2P18074 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
ERCC2P18074 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.61□□□□□ -0.07
ERCC2P18074 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
ERCC2P18074 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.61□□□□□ -0.07
ERCC2P18074 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.61□□□□□ -0.07
ERCC2P18074 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 ISCA2P1-201ENST00000425548 448 ntBASIC14.61□□□□□ -0.07
ERCC2P18074 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 CHCHD2P2-201ENST00000503744 321 ntBASIC14.61□□□□□ -0.07
ERCC2P18074 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.61□□□□□ -0.07
ERCC2P18074 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.61□□□□□ -0.07
ERCC2P18074 KRT8P1-201ENST00000557533 1207 ntBASIC14.61□□□□□ -0.07
ERCC2P18074 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.61□□□□□ -0.07
ERCC2P18074 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.61□□□□□ -0.07
ERCC2P18074 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 CICP4-201ENST00000447359 2812 ntBASIC14.61□□□□□ -0.07
ERCC2P18074 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
ERCC2P18074 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.61□□□□□ -0.07
ERCC2P18074 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.61□□□□□ -0.07
ERCC2P18074 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ERCC2P18074 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
ERCC2P18074 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.61□□□□□ -0.07
ERCC2P18074 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC2P18074 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC2P18074 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC2P18074 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.6□□□□□ -0.07
ERCC2P18074 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC2P18074 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC2P18074 AL139158.3-201ENST00000641212 1562 ntBASIC14.6□□□□□ -0.07
ERCC2P18074 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC2P18074 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
ERCC2P18074 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
ERCC2P18074 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC2P18074 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC2P18074 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
ERCC2P18074 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC2P18074 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC2P18074 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.6□□□□□ -0.07
ERCC2P18074 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
ERCC2P18074 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC2P18074 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC2P18074 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC2P18074 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC2P18074 CYP46A4P-201ENST00000414953 267 ntBASIC14.6□□□□□ -0.07
ERCC2P18074 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.6□□□□□ -0.07
ERCC2P18074 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.6□□□□□ -0.07
ERCC2P18074 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.6□□□□□ -0.07
ERCC2P18074 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.6□□□□□ -0.07
ERCC2P18074 KRT18P8-201ENST00000581937 1246 ntBASIC14.6□□□□□ -0.07
ERCC2P18074 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.6□□□□□ -0.07
ERCC2P18074 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC2P18074 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC2P18074 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.6□□□□□ -0.07
ERCC2P18074 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC2P18074 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC2P18074 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
ERCC2P18074 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC2P18074 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
ERCC2P18074 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.6□□□□□ -0.07
ERCC2P18074 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC2P18074 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC2P18074 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC2P18074 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.59□□□□□ -0.07
ERCC2P18074 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms