Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMAD6O43541 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMAD6O43541 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMAD6O43541 AGAP10P-201ENST00000454844 2418 ntBASIC14.27□□□□□ -0.12
SMAD6O43541 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.27□□□□□ -0.12
SMAD6O43541 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMAD6O43541 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMAD6O43541 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.27□□□□□ -0.12
SMAD6O43541 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMAD6O43541 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SMAD6O43541 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMAD6O43541 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMAD6O43541 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SMAD6O43541 RCC2P1-201ENST00000452257 1476 ntBASIC14.27□□□□□ -0.12
SMAD6O43541 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMAD6O43541 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.27□□□□□ -0.12
SMAD6O43541 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMAD6O43541 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMAD6O43541 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.27□□□□□ -0.13
SMAD6O43541 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMAD6O43541 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMAD6O43541 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SMAD6O43541 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMAD6O43541 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMAD6O43541 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SMAD6O43541 FXNP2-201ENST00000411625 547 ntBASIC14.27□□□□□ -0.13
SMAD6O43541 LINC00265-2P-201ENST00000413372 782 ntBASIC14.27□□□□□ -0.13
SMAD6O43541 GUSBP10-201ENST00000417412 665 ntBASIC14.27□□□□□ -0.13
SMAD6O43541 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.27□□□□□ -0.13
SMAD6O43541 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC14.27□□□□□ -0.13
SMAD6O43541 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SMAD6O43541 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.27□□□□□ -0.13
SMAD6O43541 AC018638.5-201ENST00000450885 754 ntBASIC14.27□□□□□ -0.13
SMAD6O43541 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SMAD6O43541 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SMAD6O43541 AC145285.5-201ENST00000562217 361 ntBASIC14.27□□□□□ -0.13
SMAD6O43541 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC14.27□□□□□ -0.13
SMAD6O43541 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMAD6O43541 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC14.27□□□□□ -0.13
SMAD6O43541 MIR2392-201ENST00000584881 84 ntBASIC14.27□□□□□ -0.13
SMAD6O43541 AC087392.5-201ENST00000612517 489 ntBASIC14.27□□□□□ -0.13
SMAD6O43541 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SMAD6O43541 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMAD6O43541 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC14.27□□□□□ -0.13
SMAD6O43541 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
SMAD6O43541 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SMAD6O43541 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMAD6O43541 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.27□□□□□ -0.13
SMAD6O43541 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.27□□□□□ -0.13
SMAD6O43541 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SMAD6O43541 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.27□□□□□ -0.13
SMAD6O43541 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.27□□□□□ -0.13
SMAD6O43541 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMAD6O43541 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMAD6O43541 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMAD6O43541 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMAD6O43541 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.27□□□□□ -0.13
SMAD6O43541 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.27□□□□□ -0.13
SMAD6O43541 AL365181.3-201ENST00000605886 3222 ntBASIC14.26□□□□□ -0.13
SMAD6O43541 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMAD6O43541 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMAD6O43541 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC14.26□□□□□ -0.13
SMAD6O43541 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMAD6O43541 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMAD6O43541 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SMAD6O43541 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
SMAD6O43541 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SMAD6O43541 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
SMAD6O43541 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMAD6O43541 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
SMAD6O43541 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.26□□□□□ -0.13
SMAD6O43541 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMAD6O43541 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMAD6O43541 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMAD6O43541 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMAD6O43541 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.26□□□□□ -0.13
SMAD6O43541 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMAD6O43541 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMAD6O43541 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC14.26□□□□□ -0.13
SMAD6O43541 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC14.26□□□□□ -0.13
SMAD6O43541 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMAD6O43541 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC14.26□□□□□ -0.13
SMAD6O43541 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMAD6O43541 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMAD6O43541 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.26□□□□□ -0.13
SMAD6O43541 AL031713.1-201ENST00000564813 661 ntBASIC14.26□□□□□ -0.13
SMAD6O43541 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC14.26□□□□□ -0.13
SMAD6O43541 MIR3180-2-201ENST00000581748 88 ntBASIC14.26□□□□□ -0.13
SMAD6O43541 RN7SL555P-201ENST00000584742 339 ntBASIC14.26□□□□□ -0.13
SMAD6O43541 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC14.26□□□□□ -0.13
SMAD6O43541 AC005041.3-201ENST00000606287 649 ntBASIC14.26□□□□□ -0.13
SMAD6O43541 AC005618.3-201ENST00000624928 458 ntBASIC14.26□□□□□ -0.13
SMAD6O43541 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMAD6O43541 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.26□□□□□ -0.13
SMAD6O43541 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SMAD6O43541 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.26□□□□□ -0.13
SMAD6O43541 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMAD6O43541 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMAD6O43541 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMAD6O43541 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms