Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA2E9PIF3 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA2E9PIF3 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
NPIPA2E9PIF3 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPA2E9PIF3 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC13□□□□□ -0.33
NPIPA2E9PIF3 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPA2E9PIF3 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13□□□□□ -0.33
NPIPA2E9PIF3 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC13□□□□□ -0.33
NPIPA2E9PIF3 ST13P19-201ENST00000442505 1124 ntBASIC13□□□□□ -0.33
NPIPA2E9PIF3 RPSAP15-201ENST00000448168 861 ntBASIC13□□□□□ -0.33
NPIPA2E9PIF3 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
NPIPA2E9PIF3 AC008267.1-201ENST00000474858 1069 ntBASIC13□□□□□ -0.33
NPIPA2E9PIF3 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC13□□□□□ -0.33
NPIPA2E9PIF3 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPA2E9PIF3 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC13□□□□□ -0.33
NPIPA2E9PIF3 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPA2E9PIF3 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPA2E9PIF3 AC007326.1-201ENST00000604539 458 ntBASIC13□□□□□ -0.33
NPIPA2E9PIF3 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
NPIPA2E9PIF3 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA2E9PIF3 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC13□□□□□ -0.33
NPIPA2E9PIF3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPA2E9PIF3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
NPIPA2E9PIF3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA2E9PIF3 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA2E9PIF3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA2E9PIF3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA2E9PIF3 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13□□□□□ -0.33
NPIPA2E9PIF3 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13□□□□□ -0.33
NPIPA2E9PIF3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13□□□□□ -0.33
NPIPA2E9PIF3 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA2E9PIF3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NPIPA2E9PIF3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPA2E9PIF3 AC152010.1-201ENST00000415779 2006 ntBASIC13□□□□□ -0.33
NPIPA2E9PIF3 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13□□□□□ -0.33
NPIPA2E9PIF3 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA2E9PIF3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA2E9PIF3 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 AC074138.1-201ENST00000611182 1303 ntBASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 AC064801.2-201ENST00000625052 1303 ntBASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 IQSEC3P1-201ENST00000538799 536 ntBASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 AC073352.2-201ENST00000609385 439 ntBASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 COX6A1P2-201ENST00000620597 330 ntBASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 AC012617.1-204ENST00000586340 2305 ntBASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPA2E9PIF3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms