Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RIMBP3Q9UFD9 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RIMBP3Q9UFD9 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
RIMBP3Q9UFD9 AC015959.1-201ENST00000623263 1377 ntBASIC21.3■■□□□ 1
RIMBP3Q9UFD9 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 COQ4-202ENST00000372875 928 ntTSL 2 BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 PHKA1P1-201ENST00000420457 621 ntBASIC21.29■■□□□ 1
RIMBP3Q9UFD9 FTLP16-201ENST00000446400 513 ntBASIC21.29■■□□□ 1
RIMBP3Q9UFD9 ZNF7-209ENST00000529819 513 ntTSL 4 BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 AC092745.1-201ENST00000535746 603 ntTSL 5 BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 AC007731.1-203ENST00000583722 474 ntTSL 2 BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 MIR4527HG-201ENST00000586905 675 ntTSL 1 (best) BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 AD000091.1-201ENST00000592379 287 ntBASIC21.29■■□□□ 1
RIMBP3Q9UFD9 AC006547.1-207ENST00000601746 930 ntTSL 5 BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 AC006547.1-210ENST00000609644 589 ntTSL 5 BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 C2orf27AP1-201ENST00000618128 586 ntBASIC21.29■■□□□ 1
RIMBP3Q9UFD9 ETV7-208ENST00000627426 1285 ntTSL 1 (best) BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 LINC02199-201ENST00000506655 2702 ntBASIC21.29■■□□□ 1
RIMBP3Q9UFD9 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 LINC01128-201ENST00000415295 894 ntTSL 1 (best) BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 RPSAP19-201ENST00000431241 880 ntBASIC21.29■■□□□ 1
RIMBP3Q9UFD9 HTATSF1P1-201ENST00000432008 984 ntBASIC21.29■■□□□ 1
RIMBP3Q9UFD9 AC013356.4-201ENST00000558421 482 ntTSL 2 BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 PDE4C-213ENST00000598111 1284 ntTSL 1 (best) BASIC21.29■■□□□ 1
RIMBP3Q9UFD9 AC108673.2-201ENST00000608909 565 ntBASIC21.29■■□□□ 1
RIMBP3Q9UFD9 MYO5BP1-201ENST00000610994 1239 ntBASIC21.29■■□□□ 1
RIMBP3Q9UFD9 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RIMBP3Q9UFD9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
RIMBP3Q9UFD9 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC21.28■■□□□ 1
RIMBP3Q9UFD9 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC21.28■■□□□ 1
RIMBP3Q9UFD9 ZNF726-204ENST00000531821 1798 ntTSL 1 (best) BASIC21.28■■□□□ 1
RIMBP3Q9UFD9 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC21.28■■□□□ 1
RIMBP3Q9UFD9 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC21.28■■□□□ 1
RIMBP3Q9UFD9 FAM9A-201ENST00000381003 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RIMBP3Q9UFD9 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RIMBP3Q9UFD9 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC21.28■■□□□ 1
RIMBP3Q9UFD9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
RIMBP3Q9UFD9 CYP2T1P-202ENST00000641596 2535 ntBASIC21.28■■□□□ 1
RIMBP3Q9UFD9 KCNK16-202ENST00000373229 1248 ntTSL 1 (best) BASIC21.28■■□□□ 1
RIMBP3Q9UFD9 APTX-203ENST00000379813 1121 ntTSL 5 BASIC21.28■■□□□ 1
RIMBP3Q9UFD9 MBD3L2-201ENST00000381393 793 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RIMBP3Q9UFD9 USP17L6P-201ENST00000382470 1197 ntBASIC21.28■■□□□ 1
RIMBP3Q9UFD9 HNRNPA1P46-201ENST00000411735 937 ntBASIC21.28■■□□□ 1
RIMBP3Q9UFD9 APTX-220ENST00000476858 1068 ntTSL 1 (best) BASIC21.28■■□□□ 1
RIMBP3Q9UFD9 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC21.28■■□□□ 1
RIMBP3Q9UFD9 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC21.28■■□□□ 1
RIMBP3Q9UFD9 LINC02182-201ENST00000569362 498 ntTSL 2 BASIC21.28■■□□□ 1
RIMBP3Q9UFD9 AC009166.1-201ENST00000570060 487 ntTSL 2 BASIC21.28■■□□□ 1
RIMBP3Q9UFD9 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC21.28■■□□□ 1
RIMBP3Q9UFD9 MIR4689-201ENST00000582517 70 ntBASIC21.28■■□□□ 1
RIMBP3Q9UFD9 AC007728.3-201ENST00000602304 746 ntBASIC21.28■■□□□ 1
RIMBP3Q9UFD9 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC21.28■■□□□ 1
RIMBP3Q9UFD9 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RIMBP3Q9UFD9 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC21.28■■□□□ 1
RIMBP3Q9UFD9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RIMBP3Q9UFD9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.27■■□□□ 1
RIMBP3Q9UFD9 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
RIMBP3Q9UFD9 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RIMBP3Q9UFD9 DDC-212ENST00000615193 1674 ntTSL 3 BASIC21.27■■□□□ 1
RIMBP3Q9UFD9 LILRA5-201ENST00000432233 1363 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
RIMBP3Q9UFD9 AC106872.1-201ENST00000512492 1360 ntBASIC21.27■■□□□ 1
RIMBP3Q9UFD9 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC21.27■■□□□ 1
RIMBP3Q9UFD9 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC21.27■■□□□ 1
RIMBP3Q9UFD9 CCDC89-201ENST00000316398 1412 ntAPPRIS P1 BASIC21.27■■□□□ 1
RIMBP3Q9UFD9 TEX101-203ENST00000602198 1446 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
RIMBP3Q9UFD9 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RIMBP3Q9UFD9 AC089987.2-201ENST00000328207 936 ntBASIC21.27■■□□□ 1
RIMBP3Q9UFD9 CHORDC2P-201ENST00000557601 1090 ntBASIC21.27■■□□□ 1
RIMBP3Q9UFD9 AC140658.2-201ENST00000566360 348 ntBASIC21.27■■□□□ 1
RIMBP3Q9UFD9 LINC00470-211ENST00000584492 1281 ntTSL 1 (best) BASIC21.27■■□□□ 1
RIMBP3Q9UFD9 ZNF548-207ENST00000597400 589 ntTSL 3 BASIC21.27■■□□□ 1
RIMBP3Q9UFD9 AL358215.3-201ENST00000640695 1186 ntTSL 1 (best) BASIC21.27■■□□□ 1
RIMBP3Q9UFD9 POTEC-201ENST00000358970 1629 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
RIMBP3Q9UFD9 PCDHA14-201ENST00000506751 2298 ntBASIC21.27■■□□□ 1
RIMBP3Q9UFD9 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC21.27■■□□□ 1
RIMBP3Q9UFD9 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC21.27■■□□□ 1
RIMBP3Q9UFD9 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC21.27■■□□□ 1
RIMBP3Q9UFD9 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC21.27■■□□□ 1
RIMBP3Q9UFD9 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RIMBP3Q9UFD9 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC21.26■□□□□ 0.99
RIMBP3Q9UFD9 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC21.26■□□□□ 0.99
RIMBP3Q9UFD9 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RIMBP3Q9UFD9 AC073488.1-201ENST00000416620 1600 ntBASIC21.26■□□□□ 0.99
RIMBP3Q9UFD9 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RIMBP3Q9UFD9 GGNBP1-201ENST00000374458 960 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RIMBP3Q9UFD9 IGKV6-21-201ENST00000390256 406 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms