Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.09□□□□□ -0.31
LRFN1Q9P244 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRFN1Q9P244 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
LRFN1Q9P244 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRFN1Q9P244 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
LRFN1Q9P244 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LRFN1Q9P244 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
LRFN1Q9P244 PEG13-201ENST00000631594 5667 ntBASIC13.09□□□□□ -0.31
LRFN1Q9P244 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
LRFN1Q9P244 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRFN1Q9P244 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
LRFN1Q9P244 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRFN1Q9P244 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.09□□□□□ -0.31
LRFN1Q9P244 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.31
LRFN1Q9P244 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LRFN1Q9P244 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LRFN1Q9P244 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.08□□□□□ -0.31
LRFN1Q9P244 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
LRFN1Q9P244 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.08□□□□□ -0.31
LRFN1Q9P244 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LRFN1Q9P244 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRFN1Q9P244 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRFN1Q9P244 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRFN1Q9P244 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRFN1Q9P244 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LRFN1Q9P244 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRFN1Q9P244 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 MIR645-201ENST00000385283 94 ntBASIC13.08□□□□□ -0.32
LRFN1Q9P244 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 BAX-205ENST00000391871 687 ntTSL 5 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRFN1Q9P244 AC006987.1-201ENST00000413610 527 ntBASIC13.08□□□□□ -0.32
LRFN1Q9P244 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LRFN1Q9P244 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 RPL18AP8-201ENST00000486071 528 ntBASIC13.08□□□□□ -0.32
LRFN1Q9P244 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LRFN1Q9P244 POLD4-208ENST00000532830 904 ntTSL 3 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 AC138701.2-201ENST00000553634 226 ntBASIC13.08□□□□□ -0.32
LRFN1Q9P244 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 AC135983.4-201ENST00000564116 1262 ntBASIC13.08□□□□□ -0.32
LRFN1Q9P244 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRFN1Q9P244 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.08□□□□□ -0.32
LRFN1Q9P244 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRFN1Q9P244 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LRFN1Q9P244 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRFN1Q9P244 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRFN1Q9P244 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRFN1Q9P244 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LRFN1Q9P244 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRFN1Q9P244 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRFN1Q9P244 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LRFN1Q9P244 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRFN1Q9P244 AC106881.1-201ENST00000605849 3329 ntBASIC13.08□□□□□ -0.32
LRFN1Q9P244 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRFN1Q9P244 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRFN1Q9P244 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LRFN1Q9P244 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRFN1Q9P244 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRFN1Q9P244 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LRFN1Q9P244 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRFN1Q9P244 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRFN1Q9P244 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRFN1Q9P244 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRFN1Q9P244 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 LINC01815-202ENST00000641468 1409 ntBASIC13.07□□□□□ -0.32
LRFN1Q9P244 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRFN1Q9P244 AC090505.1-201ENST00000430515 1834 ntBASIC13.07□□□□□ -0.32
LRFN1Q9P244 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 AC005089.1-201ENST00000619486 2241 ntBASIC13.07□□□□□ -0.32
LRFN1Q9P244 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRFN1Q9P244 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRFN1Q9P244 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRFN1Q9P244 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRFN1Q9P244 Z69890.1-201ENST00000382990 339 ntBASIC13.07□□□□□ -0.32
LRFN1Q9P244 IGF1-203ENST00000392904 761 ntTSL 5 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms