Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 AC090643.2-201ENST00000623442 2029 ntBASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 AL157996.1-201ENST00000624684 2299 ntBASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CUEDC1Q9NWM3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.83□□□□□ -0.19
CUEDC1Q9NWM3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.83□□□□□ -0.19
CUEDC1Q9NWM3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CUEDC1Q9NWM3 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
CUEDC1Q9NWM3 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
CUEDC1Q9NWM3 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
CUEDC1Q9NWM3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 KRT8P21-201ENST00000430398 1491 ntBASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 USP17L6P-201ENST00000382470 1197 ntBASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 AC011742.3-201ENST00000439053 820 ntBASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 RN7SL718P-201ENST00000581254 303 ntBASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 AL805961.1-203ENST00000641078 1258 ntBASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 CICP20-201ENST00000443330 2801 ntBASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CUEDC1Q9NWM3 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms