Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 HSFY5P-201ENST00000453726 309 ntBASIC12.99□□□□□ -0.33
USB1Q9BQ65 BX284668.4-201ENST00000453917 508 ntBASIC12.99□□□□□ -0.33
USB1Q9BQ65 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
USB1Q9BQ65 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.99□□□□□ -0.33
USB1Q9BQ65 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
USB1Q9BQ65 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
USB1Q9BQ65 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC12.99□□□□□ -0.33
USB1Q9BQ65 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.99□□□□□ -0.33
USB1Q9BQ65 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.99□□□□□ -0.33
USB1Q9BQ65 AC131206.1-201ENST00000538078 1211 ntBASIC12.99□□□□□ -0.33
USB1Q9BQ65 TUBD1-206ENST00000539018 1027 ntTSL 2 BASIC12.99□□□□□ -0.33
USB1Q9BQ65 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.99□□□□□ -0.33
USB1Q9BQ65 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
USB1Q9BQ65 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC12.99□□□□□ -0.33
USB1Q9BQ65 MIR3615-201ENST00000581999 87 ntBASIC12.99□□□□□ -0.33
USB1Q9BQ65 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.99□□□□□ -0.33
USB1Q9BQ65 AC100814.1-201ENST00000606963 623 ntBASIC12.99□□□□□ -0.33
USB1Q9BQ65 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.99□□□□□ -0.33
USB1Q9BQ65 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
USB1Q9BQ65 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12.99□□□□□ -0.33
USB1Q9BQ65 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.99□□□□□ -0.33
USB1Q9BQ65 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.99□□□□□ -0.33
USB1Q9BQ65 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
USB1Q9BQ65 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
USB1Q9BQ65 ZBED1P1-201ENST00000502364 1930 ntBASIC12.99□□□□□ -0.33
USB1Q9BQ65 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
USB1Q9BQ65 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
USB1Q9BQ65 BX324167.2-201ENST00000623717 3316 ntBASIC12.99□□□□□ -0.33
USB1Q9BQ65 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
USB1Q9BQ65 NUTM2HP-201ENST00000442076 2498 ntBASIC12.99□□□□□ -0.33
USB1Q9BQ65 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
USB1Q9BQ65 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.99□□□□□ -0.33
USB1Q9BQ65 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
USB1Q9BQ65 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
USB1Q9BQ65 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.99□□□□□ -0.33
USB1Q9BQ65 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
USB1Q9BQ65 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
USB1Q9BQ65 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
USB1Q9BQ65 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 AC092053.3-201ENST00000641308 4975 ntBASIC12.98□□□□□ -0.33
USB1Q9BQ65 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 TCEAL1-201ENST00000372624 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 TCEAL1-202ENST00000372625 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 LIAS-204ENST00000424936 1011 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 PUDPP3-201ENST00000445368 636 ntBASIC12.98□□□□□ -0.33
USB1Q9BQ65 GCOM2-201ENST00000509133 1104 ntBASIC12.98□□□□□ -0.33
USB1Q9BQ65 MTCO3P42-201ENST00000509488 518 ntBASIC12.98□□□□□ -0.33
USB1Q9BQ65 MTCO3P39-201ENST00000514812 518 ntBASIC12.98□□□□□ -0.33
USB1Q9BQ65 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 AC005324.6-201ENST00000587972 613 ntBASIC12.98□□□□□ -0.33
USB1Q9BQ65 AC009955.4-201ENST00000597192 544 ntBASIC12.98□□□□□ -0.33
USB1Q9BQ65 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
USB1Q9BQ65 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.98□□□□□ -0.33
USB1Q9BQ65 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms