Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 FTLP1-201ENST00000449155 526 ntBASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 IGLV3-15-201ENST00000518356 244 ntBASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 PRKXP1-201ENST00000561423 1122 ntBASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 TMEM198B-204ENST00000484016 896 ntBASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 AC242376.1-201ENST00000559033 726 ntBASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 MIR4754-201ENST00000582477 89 ntBASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 AC092299.1-201ENST00000632679 757 ntBASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 AC006453.1-201ENST00000636037 1257 ntBASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 AL590440.2-201ENST00000641973 1595 ntBASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 AC018629.1-201ENST00000623381 1736 ntBASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms