Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 AC103592.1-201ENST00000394513 664 ntBASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 HMGA1P1-201ENST00000415560 1062 ntBASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 RIT1-205ENST00000539040 919 ntTSL 2 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 AC104982.3-201ENST00000581995 514 ntBASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 AC022748.3-201ENST00000621828 275 ntBASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 PCBP2-OT1-201ENST00000634357 590 ntBASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 AC004923.1-202ENST00000642106 209 ntBASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 AC018629.1-201ENST00000623381 1736 ntBASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 OR2R1P-201ENST00000441404 914 ntBASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 KRT18P8-201ENST00000581937 1246 ntBASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 Six3os1_5.1-201ENST00000611000 271 ntBASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 DDX5-235ENST00000630471 473 ntTSL 4 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms